PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_10.304

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

E2F/DP

Protein Properties

Length: 367aa MW: 40495.8 Da PI: 5.7287

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_10.304	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.5	7.3e-26	99	164	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL llt+kf++ll+++e+g+++ln++a+ L +v ++RRiYDi+NVLe+++l+ek+ kn+irwkg evm.model.AsparagusV1_10.304 99 RYDSSLSLLTKKFVNLLQQQEDGTLDLNKAAELL---EV--QKRRIYDITNVLEGVGLMEKSLKNRIRWKG 164 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 367 aa Download sequence
MTRVENKGLV NERQKGSKDN AKSFAARLKQ AVKAGHKVEN VQGKTEQGQK EESKAHIPPT 60 LPAAGGKQKI RKPKNKRLMP QVIGSVDGVP DPLGANSCRY DSSLSLLTKK FVNLLQQQED 120 GTLDLNKAAE LLEVQKRRIY DITNVLEGVG LMEKSLKNRI RWKGDDVMGS MELDNQIAEL 180 KVANGSLYKE ECRTDRMIME VEEKLRILKE DTKLLYVTKE DINSLPCFQD STLIAIKAPR 240 ATSIEAPDPD EGLGFSERQH QLVLRTSMGP ISCFLISNHE ETPGVSNEGD HPVPMDLSLD 300 ISWHNRNAGS SSHPMDQEAN TSDPLISDGL VGGIMKIVPS NGDADADYWF DSGIQGSITD 360 LWSQYT*

Sequence ? help Back to Top

Protein Sequence Length: 367 aa Download sequence

MTRVENKGLV NERQKGSKDN AKSFAARLKQ AVKAGHKVEN VQGKTEQGQK EESKAHIPPT  60
LPAAGGKQKI RKPKNKRLMP QVIGSVDGVP DPLGANSCRY DSSLSLLTKK FVNLLQQQED  120
GTLDLNKAAE LLEVQKRRIY DITNVLEGVG LMEKSLKNRI RWKGDDVMGS MELDNQIAEL  180
KVANGSLYKE ECRTDRMIME VEEKLRILKE DTKLLYVTKE DINSLPCFQD STLIAIKAPR  240
ATSIEAPDPD EGLGFSERQH QLVLRTSMGP ISCFLISNHE ETPGVSNEGD HPVPMDLSLD  300
ISWHNRNAGS SSHPMDQEAN TSDPLISDGL VGGIMKIVPS NGDADADYWF DSGIQGSITD  360
LWSQYT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.3	6e-81	E2F/DP family protein