PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.273 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 724aa MW: 80236.5 Da PI: 8.1645 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.3 | 1.7e-08 | 50 | 92 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + +a +q G++ +++I +++ + +q++++++ + evm.model.AsparagusV1_10.273 50 AWTRQEEENFFNALRQVGKN-FEKITFRVQ-SKNKNQVRHYYYRL 92 6*****************99.*********.***********976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 724 aa Download sequence |
METQPHVPSQ IQGPQAEDLL INDRGSTAPA TPLVAVNEKP AKKVTRQWAA WTRQEEENFF 60 NALRQVGKNF EKITFRVQSK NKNQVRHYYY RLVRRMNKLL GPGLCLDAKN SKDTIAAMLR 120 WWSLLEKHSC PASKLHLKPR RFKIFLESLE NQLLKDRNKI RRKRPSQGEK YLNVVSATSL 180 PSKALENDVH PVVDIQNTSK VESNGPSQKR NMSANINFSK GELPPARSVR QKRRPAGLVA 240 SAAYRRWEKA AMAGVSLVAD AAEQLERATN GGNCSVDQIR SGQKNIDCAG NNQGHLCPPT 300 LLGTCLHQIK DAVMQPVVKL KLQLFPIDEI TRKALEKDAC NPHLELTLSS RKRISSVLEH 360 LNRKWGSSSI ASGELTLLPY SAQQEDISYR KWTAKDTISS AADVYAAVGS PTIFRLRYGW 420 FSNTEPVMRE TPNVESPGLA QPLAHISEQP MKSSGDLSTP LSSTVIVHEP IPEEPPSDPD 480 DELLGSSALT PTSENRKRTG DGHCSEQQQV SVVDWVDSLT NISIGDLLSE ASRASKSSCG 540 YSSLGKTCPS PQEKPFSSDA FDPVRTQTAS SSMWNAEETC DEFSFRMARA CMSRDSPSNP 600 SIKDHKEIVV SESLFKNHLK VPPKSGDLEV ASEAEKDTSY KEDKDVSPKD INLMDIYWPD 660 SLGPLELEMP SSSRYQGQDV VIGDSNSFGF LGRMISNSLD AFQNFSLFGQ EKSASIHLDT 720 NLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.3 | 1e-162 | MYB_related family protein |