PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.248
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 318aa    MW: 34486.9 Da    PI: 7.5669
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.248genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.14e-134690147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  r +WT+ E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  evm.model.AsparagusV1_10.248 46 RENWTEVEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 90
                                  789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
MVSTNIVGQQ QAMALPGAIG SLTATSAAAE DPSTKIRKPY TITKSRENWT EVEHDKFLEA  60
LQLFDRDWKK IEAFVGSKTV IQIRSHAQKY FLKVQKSGTS EHVPPPRPKR KAAHPYPQKA  120
SKNAHLLPQP AAVLQPSSCL LERGYTPRTD SSSVLRNSSK SGKMSSWAQC SVHPYAVDMA  180
KDNIGPAGAM VASNCCSSTT SPPSTWQVCE TSDQGNNVPS VRAMPDFAEV YSFIGSIFDP  240
STSGHLPKLK EMDPIDVETA LLLMKNLSIN LTSPDFEDHR KLLSSYEASS EEVKSGSANS  300
TIEADEIVNG SSMVKVE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.26e-91MYB_related family protein