PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1900
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 419aa    MW: 45978.8 Da    PI: 4.9893
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1900genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.51.5e-33217270255
                        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    +r+rWtpeLHe Fveav+qLGGsekAtPk +l++mkv+gLt++hvkSHLQkYR+
  evm.model.AsparagusV1_10.1900 217 ARMRWTPELHELFVEAVNQLGGSEKATPKGVLKIMKVDGLTIYHVKSHLQKYRT 270
                                    7****************************************************8 PP

2Myb_DNA-binding56.37.4e-18218269148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWT+e++el+v+av+qlGg    t+k + + m   g+t +++ks++qky+
  evm.model.AsparagusV1_10.1900 218 RMRWTPELHELFVEAVNQLGGSekaTPKGVLKIMKvDGLTIYHVKSHLQKYR 269
                                    89******************99*****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 419 aa     Download sequence    
MSSSLPVLPI TSGENYPKLP DSQQVSMERE LRSNPVNPHK TTFVPSNGAV GPLFSSAPGL  60
TSDLQYSTIS PNVKQPINAS FIPQSQSSCT FQSSLSNHSR ESNEINWCQD TLQGMLDYSE  120
EVTVENNQIQ SSTIMPSDNL NQQNDWWSDL VNEDWKDILN ETSGSEHQPK VVYSAAPVSS  180
NVSVPQSQSH QMVPSQSGEL GAVNSPSTSA GGAPARARMR WTPELHELFV EAVNQLGGSE  240
KATPKGVLKI MKVDGLTIYH VKSHLQKYRT ARYRPDSSEG TSEKKSNPLD EMSSLDLKTG  300
IEITEALRLQ MEVQKRLHEQ LEIQRKLQLR IEEQGRYLQM MFEKQCKSNS DKLTPSSSDP  360
DNPNPQPSAL TLADNGAKEK DQEISEGLGE ADTVSGSQSQ SPSRKRSRAE ETTSASSA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28610.18e-83G2-like family protein