PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.1900 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 419aa MW: 45978.8 Da PI: 4.9893 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 106.5 | 1.5e-33 | 217 | 270 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +r+rWtpeLHe Fveav+qLGGsekAtPk +l++mkv+gLt++hvkSHLQkYR+ evm.model.AsparagusV1_10.1900 217 ARMRWTPELHELFVEAVNQLGGSEKATPKGVLKIMKVDGLTIYHVKSHLQKYRT 270 7****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.4e-18 | 218 | 269 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++el+v+av+qlGg t+k + + m g+t +++ks++qky+ evm.model.AsparagusV1_10.1900 218 RMRWTPELHELFVEAVNQLGGSekaTPKGVLKIMKvDGLTIYHVKSHLQKYR 269 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 419 aa Download sequence |
MSSSLPVLPI TSGENYPKLP DSQQVSMERE LRSNPVNPHK TTFVPSNGAV GPLFSSAPGL 60 TSDLQYSTIS PNVKQPINAS FIPQSQSSCT FQSSLSNHSR ESNEINWCQD TLQGMLDYSE 120 EVTVENNQIQ SSTIMPSDNL NQQNDWWSDL VNEDWKDILN ETSGSEHQPK VVYSAAPVSS 180 NVSVPQSQSH QMVPSQSGEL GAVNSPSTSA GGAPARARMR WTPELHELFV EAVNQLGGSE 240 KATPKGVLKI MKVDGLTIYH VKSHLQKYRT ARYRPDSSEG TSEKKSNPLD EMSSLDLKTG 300 IEITEALRLQ MEVQKRLHEQ LEIQRKLQLR IEEQGRYLQM MFEKQCKSNS DKLTPSSSDP 360 DNPNPQPSAL TLADNGAKEK DQEISEGLGE ADTVSGSQSQ SPSRKRSRAE ETTSASSA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 8e-83 | G2-like family protein |