PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1688
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family E2F/DP
Protein Properties Length: 293aa    MW: 33214.7 Da    PI: 8.1703
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1688genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP82.63.2e-26123188171
                        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                                    r+++sL+ lt+kf++ll+++++gi++ln++ ++L   +v  ++RRiYDi+NVLe+++liekk kn+i+wkg
  evm.model.AsparagusV1_10.1688 123 RYDNSLGFLTKKFINLLKHAQDGILDLNKAVETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRISWKG 188
                                    689*******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MSGAHPMTWR LPFPPRFADP DAYHRFDGAS GRIEEDVADV LVIKTPLKRK PDVEDPETAD  60
SNEWTNSPRY VKGVTNPFQT PSSIKGGRIC SKYNPLKFKP EYTTPIQYAG SSSNDLTPVS  120
NFRYDNSLGF LTKKFINLLK HAQDGILDLN KAVETLEVQK RRIYDITNVL EGIGLIEKKL  180
KNRISWKGSD DSRPGEVNDV PILEADIKKL HMKERNLDDR ISEIKARLKR ISEDESTQKF  240
LYVIEEDIKS LPCFQNKTLI AIKAPLSTNM QVPYPDSVRE SEGRVENNAS YL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.34e-78E2F/DP family protein