PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1666
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 311aa    MW: 34170.5 Da    PI: 8.1974
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1666genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH291.9e-093481354
                                   HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                     +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL  +++ +k+L
  evm.model.AsparagusV1_10.1666 34 IQKADREKLRRDRLNEQFLELGKALDPD----RPKNDKATILSDTIQMLKDL 81
                                   56789********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MDQWKPSEGF FDASGSSSQR VGNSAKDPSS ARKIQKADRE KLRRDRLNEQ FLELGKALDP  60
DRPKNDKATI LSDTIQMLKD LTTQVNKLKT EYSSLSEESR ELTQEKNELR EEKATLKSEI  120
DNLNSQYQQR LRCVYPWAPV DPSVVMGPPP YPYPVPVPIP SAPIPVHPMQ PYPFFRNQTP  180
GAYVPYTSST DHSSSQNLPH SQPNSRSQTS SQQDSRSKPL DLQHRNGSEK SDDFSDVVTE  240
LELKTPGSAG MSSHSKAAKD QDLSSEGCKG KQRPPRRNSS GNTERSSSSR SSSSSSGLPG  300
SSGDGSVADN *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.19e-48bHLH family protein