PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_10.1623

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

ERF

Protein Properties

Length: 707aa MW: 78304.7 Da PI: 6.1863

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_10.1623	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	30.9	6.6e-10	615	644	27	55
AP2 27 kr.krfslgkfgtaeeAakaaiaarkkleg 55 + r++lg+f taeeAa+a+++a+ ++g evm.model.AsparagusV1_10.1623 615 RGgVRVWLGTFNTAEEAARAYDRAAYTMRG 644 2249************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MRRLRAASSL LSLFSKPKLS SQNTLPFLHS LPSTSRSDLK PPITFPKCPR LFQTLSQSTP 60 PLESLKSQDK LLLAFKSLDS SSKVDSFSSN ELVKALDLTI RALEIFERDE GGSISVAKAL 120 RLLGLISCKL KKFGDSLESL NTAVVILDRL EKEGFNDSEI RAVSLMVYLQ LVETNSEMGR 180 KWDTLTSLKR VFQLRKSIFD PNSPEMGAAY KDLCEAYAVV LDFKEALPLI LKALEIFEVN 240 YGCDSVEVAR VRQLLSVIYV GLDENDKALE QIEFAKGIFT CLELEDDLLN LLVEEANIKI 300 SMGGFSEAIE ILKSVIQRVG KESKIRAFVF VSMAKALCSQ EKFGEAKRCL EIACGVLDKF 360 ESVDSSKVFD TYAEISMIYE IMNEFETALS LMERTLAMVS KSPREQHLEG SISARMGWLL 420 LLTGRAERAI PYLERGEQRL KDSFGEMHFG LGFVSKHLGQ AYMEVGRPAH AVQVLATAYN 480 ILSRWFGPKH EDSIDACQSL ANAYATKASS SSIDTKQGHY ASAMEFQQRV ITAWESCGPN 540 ATDELREAHR LFEQLKKKAL GSPSAVYPAN ALPLSQCRLT LPKQTPVMVG SGTGESGADR 600 GGSMRPRSAI RNSSRGGVRV WLGTFNTAEE AARAYDRAAY TMRGPAAILN FPEEVNSVYS 660 NSSSSSSSPR EKMSVRKQEE KEVIEIECLD ERVLEELLEY GEKGGT*

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MRRLRAASSL LSLFSKPKLS SQNTLPFLHS LPSTSRSDLK PPITFPKCPR LFQTLSQSTP  60
PLESLKSQDK LLLAFKSLDS SSKVDSFSSN ELVKALDLTI RALEIFERDE GGSISVAKAL  120
RLLGLISCKL KKFGDSLESL NTAVVILDRL EKEGFNDSEI RAVSLMVYLQ LVETNSEMGR  180
KWDTLTSLKR VFQLRKSIFD PNSPEMGAAY KDLCEAYAVV LDFKEALPLI LKALEIFEVN  240
YGCDSVEVAR VRQLLSVIYV GLDENDKALE QIEFAKGIFT CLELEDDLLN LLVEEANIKI  300
SMGGFSEAIE ILKSVIQRVG KESKIRAFVF VSMAKALCSQ EKFGEAKRCL EIACGVLDKF  360
ESVDSSKVFD TYAEISMIYE IMNEFETALS LMERTLAMVS KSPREQHLEG SISARMGWLL  420
LLTGRAERAI PYLERGEQRL KDSFGEMHFG LGFVSKHLGQ AYMEVGRPAH AVQVLATAYN  480
ILSRWFGPKH EDSIDACQSL ANAYATKASS SSIDTKQGHY ASAMEFQQRV ITAWESCGPN  540
ATDELREAHR LFEQLKKKAL GSPSAVYPAN ALPLSQCRLT LPKQTPVMVG SGTGESGADR  600
GGSMRPRSAI RNSSRGGVRV WLGTFNTAEE AARAYDRAAY TMRGPAAILN FPEEVNSVYS  660
NSSSSSSSPR EKMSVRKQEE KEVIEIECLD ERVLEELLEY GEKGGT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G04370.1	1e-09	ERF family protein