PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.1591 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 323aa MW: 35544.8 Da PI: 8.6332 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.5e-18 | 202 | 252 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + ng r++lg+f++ae+Aa a+++a+ + +g evm.model.AsparagusV1_10.1591 202 CYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDSAEDAALAYDQAAFSTRG 252 8********.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence |
MAFVLLQPSF KNLAVDFGSK SLKFALSGAL ALGIALSGLE AVDAKVGVNK PELLPKEFSP 60 VIDVAGFLSA GQENRLRQEI DDLEKDTGFK LRLLAQNYPD TPGLAIKDFW QVDDRTIVFV 120 ADPTFGNILN FNVGELVDLD IPRSFWSRLA GKYGNMFYWK EKGEDVSIEA AVMAISNCLR 180 EPVGPNNCSE NEKVCNKKKD KCYRGVRRRP WGKYAAEIRD STRNGVRVWL GTFDSAEDAA 240 LAYDQAAFST RGATAVMNFP LEEVRESLRG LGYCKMEDDG SPVIGLKKRY SMKRKAVGVR 300 KGKGIEKREV KVECSGVGGF GC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 4e-33 | ERF family protein |