PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_10.1569
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family E2F/DP
Protein Properties Length: 305aa    MW: 33573.9 Da    PI: 8.0743
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_10.1569genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP87.78.6e-2853135271
                        E2F_TDP   2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkek 64 
                                    ++++Lr++++k   ++ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k
  evm.model.AsparagusV1_10.1569  53 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpvngigppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DK 128
                                    689********...*****999*******************************************************.** PP

                        E2F_TDP  65 neirwkg 71 
                                    +ei+wkg
  evm.model.AsparagusV1_10.1569 129 KEIQWKG 135
                                    *****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MVIGASDDAN KSPANSSKLR SSWGTPAISG GQAPSSGGKK KKRGTRAVAG DKSGRGLRQF  60
SMKVCEKVES KGRTTYNEVA DELVAEFADP VNGIGPPDQQ QYDEKNIRRR VYDALNVLMA  120
MDIISKDKKE IQWKGLPRTS LNDIEELKAE RVALKSRIEK KAAYLQELED QYIGLQNLVH  180
RNEQLYGDNP PGGVALPFIL IQTRPHATVE VEISEDMQLV HFDFNSTPFE LHDDSYVLKA  240
MRFCDKEQNN GVQDPTSNLG ESSSIQCMFP SQTPQPTRPS SLGKVPSSPP IPGILKARGS  300
KHEH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-125E2F/DP family protein