PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.13 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | TCP | ||||||||
Protein Properties | Length: 176aa MW: 19391.1 Da PI: 6.5176 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 34.5 | 7.1e-11 | 68 | 93 | 2 | 27 |
TCP 2 agkkdrhskihTkvggRdRRvRlsae 27 g+kdrhsk++T++g+RdRRvRlsa evm.model.AsparagusV1_10.13 68 SGGKDRHSKVYTAKGLRDRRVRLSAA 93 689*********************85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MEIEENHRNH KRSRVGNGNQ AAAKLDDDED DGDQNKELSI INNNSSSNNR MRPWHHPSSR 60 IFRVSRASGG KDRHSKVYTA KGLRDRRVRL SAAESAISEL PSLDTTFPDS PLELQPLPSD 120 SGIDPEADPS YNQQQHSSAS ETSKGWSKTY VETGIGNPLK ELLIPRGQNC STALD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 2e-18 | TCP family protein |