PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_10.111

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 321aa MW: 35503 Da PI: 5.4048

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_10.111	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.4	2.2e-15	14	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd+ lvd++++ G +W+ ++ g++R++k+c++rw +yl evm.model.AsparagusV1_10.111 14 KGPWTPEEDKVLVDYIQRNG--SWRNLPKNAGLNRCGKSCRLRWTNYL 59 79****************..6*********************97 PP
2	Myb_DNA-binding	56.4	7.1e-18	65	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE+ l+++++ lG++ W++Ia +++ gRt++++k++w+++l evm.model.AsparagusV1_10.111 65 RGKFTEEEERLIIHLHSVLGNK-WSSIATRLP-GRTDNEIKNYWNTHL 110 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MGRSPCCDEI GVKKGPWTPE EDKVLVDYIQ RNGSWRNLPK NAGLNRCGKS CRLRWTNYLR 60 PDIKRGKFTE EEERLIIHLH SVLGNKWSSI ATRLPGRTDN EIKNYWNTHL KKKLLCMGID 120 PVTHRRRTDL DILSSLPALL AAANIGNLTV PSAWDNALRI QADAANLANV QMLQSLIQLV 180 TSNYSPLFDA TCLLGSNGNQ FGDAVQLNRQ LEAVLNGSLS LGQAPVTNLN QLGDSVTLNN 240 LQDQENVIKN EDINLYANVS IPSLVSASPE NVASDQAQEP SQSNSSSSMH LEAWEGLNPD 300 DDFGLKDILE QMSWSNNNML *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	3e-85	MYB family protein