PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_10.100 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 124aa MW: 14084.5 Da PI: 10.6682 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 58.1 | 2.1e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G g+W++ ++ g+ R++k+c++rw +yl evm.model.AsparagusV1_10.100 16 KGSWTPEEDMRLIAYIHKYGHGNWRALPKFAGLLRCGKSCRLRWINYL 63 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.8e-17 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ +lG++ W++Ia++++ gRt++++k+ w+++l evm.model.AsparagusV1_10.100 69 RGNFTKEEEDTIIKLHGLLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MGRGRAPCCA KVGLNKGSWT PEEDMRLIAY IHKYGHGNWR ALPKFAGLLR CGKSCRLRWI 60 NYLRPDIKRG NFTKEEEDTI IKLHGLLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLVL 120 PTG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79180.1 | 5e-69 | MYB family protein |