PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.96 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 202aa MW: 22384.5 Da PI: 6.8916 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 72.6 | 4.8e-23 | 27 | 97 | 1 | 67 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHH CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWke 67 f+k ltpsdv+k++rlv+pk++ae+h + e++ l++edesg+sW+++++y+ +s++yvltkGW++ evm.model.AsparagusV1_09.96 27 FEKPLTPSDVGKLNRLVIPKQHAEKHfpldseS--GEKGLLLSFEDESGKSWNFRYSYWTSSQSYVLTKGWSR 97 99**************************99543..457789******************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence |
MGSNHNHHYF QFEQEQDRGV YRKEHMFEKP LTPSDVGKLN RLVIPKQHAE KHFPLDSESG 60 EKGLLLSFED ESGKSWNFRY SYWTSSQSYV LTKGWSRRRV SNETAAPSAS VSARSPSFYA 120 AGASTPYAAP YYYMSPVNSG DQAAASSMDN TVAVATTGNS RRLRLFGVNL ECGPDPEEPD 180 QHSASGAWNQ FMPTNASTSQ L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11580.1 | 1e-42 | B3 family protein |