PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.665 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 187aa MW: 20865 Da PI: 10.215 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.2 | 5.4e-52 | 8 | 132 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lppGfrFhPtdeelv++yL++k++g +l + +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ sg evm.model.AsparagusV1_09.665 8 LPPGFRFHPTDEELVMHYLCRKCAGLSLAV-PIIAEIDLYKFDPWQLPEMALYGEKEWYFFSPRDRKYPNGSRPNRAAGSG 87 79*************************999.88***************7666789************************** PP NAM 82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 yWkatg dk+v s + v +kk Lvfy g+apkg kt+W+mheyrl evm.model.AsparagusV1_09.665 88 YWKATGADKPVGS--PKPVAIKKALVFYAGKAPKGDKTNWIMHEYRL 132 ***********99..789***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 187 aa Download sequence |
MSSGNLQLPP GFRFHPTDEE LVMHYLCRKC AGLSLAVPII AEIDLYKFDP WQLPEMALYG 60 EKEWYFFSPR DRKYPNGSRP NRAAGSGYWK ATGADKPVGS PKPVAIKKAL VFYAGKAPKG 120 DKTNWIMHEY RLADVDRSAR RKNSLRLDDW VLCRIYKKKG GGEKLTGPEK KPAGSRASGP 180 ASPNLH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G01720.1 | 1e-105 | NAC family protein |