PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.570 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 210aa MW: 24105.2 Da PI: 8.5076 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 27.1 | 7.4e-09 | 126 | 168 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ r RR+ri +++ L++l+P +K++ a++L +A++Y+k L evm.model.AsparagusV1_09.570 126 IAARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIRYVKFL 168 56799*****************87.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MDITKTNTNS TTPTTSSSSS WDLDMTMNNH ILLDQIQPPY DLTLNPSLHH HFQNLIPPNP 60 QFQLELSESD NNAQSHNDNE EEEEALGAMK EMMYKIAAMQ PVDIDPSTIK KPKRRNVRIS 120 DDPQSIAARH RRERISERIR ILQRLVPGGT KMDTASMLDE AIRYVKFLKR QVQELQANRW 180 GPKSESRSGL WVGVWAHRHR QGWVVCRQG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G09750.1 | 2e-40 | bHLH family protein |