PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.500

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Nin-like

Protein Properties

Length: 613aa MW: 68226 Da PI: 6.9787

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.500	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.8	5.9e-30	531	581	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ evm.model.AsparagusV1_09.500 531 EKNISLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 581 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MENLHRETGF GLRYIQQSPM DSFTPVDCST GSPISDDFFG LSALLTSDSY PDLFSPFSYS 60 SSPFSYSTLQ QFPNSSNDMN NFTLSSADAS DERMVSAIPK SIPGFTLAER MLKALSLFKE 120 SSGGGILAQV WMPVKHGNGH VLSTSDQPFL LDQILAGYRE VSRAFTFSAE EAPGLFPGLP 180 GRVFISGLPE WTSNVVYYNN VEYLRAEYAH THEVKGSLAV PVFDPKERSC CAVLELVTTK 240 EKPDFDMEME SVCNALQAVD LRSIKGQPYQ QLLTKNQKSA FNEILDVLRA CCHAHMLPLA 300 LTWVPFSYEG DRVPDATKEV IREVNSNLMK KSLLCIEESA CYVNDSRMNG FLHACSEHCL 360 EKGQGISGKA LQSNHPFFSP DVKGYGIREY PLAHHARKYG LNAAVAIRLR SKLTDNDDYI 420 LEFFLPVNCR GSTEQQELLN NLSNTMQRIC RSLRTVSDDE IHATEKKVGT NSPSPEISIK 480 CPQQMDSDNE VLADFSFDDI SAKSGERGDA NCEQFKSDST KQTEKKRSTS EKNISLSVLQ 540 QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLSDRFS TRSRGSTKIR 600 PVNWVSRCCS VT*

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MENLHRETGF GLRYIQQSPM DSFTPVDCST GSPISDDFFG LSALLTSDSY PDLFSPFSYS  60
SSPFSYSTLQ QFPNSSNDMN NFTLSSADAS DERMVSAIPK SIPGFTLAER MLKALSLFKE  120
SSGGGILAQV WMPVKHGNGH VLSTSDQPFL LDQILAGYRE VSRAFTFSAE EAPGLFPGLP  180
GRVFISGLPE WTSNVVYYNN VEYLRAEYAH THEVKGSLAV PVFDPKERSC CAVLELVTTK  240
EKPDFDMEME SVCNALQAVD LRSIKGQPYQ QLLTKNQKSA FNEILDVLRA CCHAHMLPLA  300
LTWVPFSYEG DRVPDATKEV IREVNSNLMK KSLLCIEESA CYVNDSRMNG FLHACSEHCL  360
EKGQGISGKA LQSNHPFFSP DVKGYGIREY PLAHHARKYG LNAAVAIRLR SKLTDNDDYI  420
LEFFLPVNCR GSTEQQELLN NLSNTMQRIC RSLRTVSDDE IHATEKKVGT NSPSPEISIK  480
CPQQMDSDNE VLADFSFDDI SAKSGERGDA NCEQFKSDST KQTEKKRSTS EKNISLSVLQ  540
QYFSGSLKDA AKSIGVCPTT LKRICRQHGI SRWPSRKINK VNRSLSDRFS TRSRGSTKIR  600
PVNWVSRCCS VT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein