PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1505

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

LFY

Protein Properties

Length: 455aa MW: 49755.4 Da PI: 9.0675

Description

LFY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1505	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FLO_LFY	39.3	1.1e-12	1	77	89	157
FLO_LFY 89 lmkslseifrldllvGery.Gikaavraerrrlee......eeaekkrrkll.sedeetaldalsqeglseepvqee 157 +m++++++fr+d +r G +aavraerrr+e +++ +r+ ll s d+ +aldalsqeglsee+ ++e evm.model.AsparagusV1_09.1505 1 MMSAVCHVFRCDHTRRDRCtGSRAAVRAERRRMEMvnavinVDVDGRRHLLLlSPDHPAALDALSQEGLSEERAHHE 77 89**********9999559********999999987777777765569****************98775 PP
2	FLO_LFY	64.2	3e-20	81	143	280	342
FLO_LFY 280 kvtnqvfryakkagasyinkPkmrhYvhCYalhcLdeeasnalrrafkergenvGawrqacyk 342 vtnqvfryakk+gasyinkPkmrhYvhC + + + + envGaw + evm.model.AsparagusV1_09.1505 81 EVTNQVFRYAKKVGASYINKPKMRHYVHCTPSTASARPPPTPSAASKRTVCENVGAWAAGLLQ 143 7****************************9877777766666566666778999999766555 PP

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence
MMSAVCHVFR CDHTRRDRCT GSRAAVRAER RRMEMVNAVI NVDVDGRRHL LLLSPDHPAA 60 LDALSQEGLS EERAHHESGG EVTNQVFRYA KKVGASYINK PKMRHYVHCT PSTASARPPP 120 TPSAASKRTV CENVGAWAAG LLQPWWPSSP SRLGHRRRSF AGTSSPVDLN AINELEDAEG 180 SRKKADLSLV EAXXXXASSS FFASKNHPVA GDRSPDDSRT SLDSPRRRLI DAGLIGSARG 240 FATDTLAPRQ QQDLGLADLP ATVAAVKNPT SKIVYDEYNH ERFPPGDPSK RAFAYFVLTG 300 GRFVYASLLR LLVLKLVLSM SASKDVLALA SLEVDLSNIE PGSTVTVKWR GKPVFIRRRT 360 EDDIKLANSV DVASLRDPQE DAARVKNPEW LVVVGVCTHL GCIPLPNAGD YGGWFCPCHG 420 SHYDISGRIR KGPAPFNLEV PTYSFLEENK LLVG*

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence

MMSAVCHVFR CDHTRRDRCT GSRAAVRAER RRMEMVNAVI NVDVDGRRHL LLLSPDHPAA  60
LDALSQEGLS EERAHHESGG EVTNQVFRYA KKVGASYINK PKMRHYVHCT PSTASARPPP  120
TPSAASKRTV CENVGAWAAG LLQPWWPSSP SRLGHRRRSF AGTSSPVDLN AINELEDAEG  180
SRKKADLSLV EAXXXXASSS FFASKNHPVA GDRSPDDSRT SLDSPRRRLI DAGLIGSARG  240
FATDTLAPRQ QQDLGLADLP ATVAAVKNPT SKIVYDEYNH ERFPPGDPSK RAFAYFVLTG  300
GRFVYASLLR LLVLKLVLSM SASKDVLALA SLEVDLSNIE PGSTVTVKWR GKPVFIRRRT  360
EDDIKLANSV DVASLRDPQE DAARVKNPEW LVVVGVCTHL GCIPLPNAGD YGGWFCPCHG  420
SHYDISGRIR KGPAPFNLEV PTYSFLEENK LLVG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G61850.1	2e-13	LFY family protein