PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1409
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 378aa    MW: 41822.6 Da    PI: 6.1522
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1409genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding33.41e-105999244
                                   SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS
                Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44
                                   ++WT  E +ll++av ++G + W++Ia+++  ++   +c+ r+
  evm.model.AsparagusV1_09.1409 59 NAWTDAETLLLLEAVLKHGDD-WDLIAQHVR-TKNKLDCIARL 99
                                   58*****************88.*********.999999*9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 378 aa     Download sequence    
MGKNGEVCGI CGNQMEGTGK ADSAVCSKCS ENKNTKEEKL VDGSEANNHL DGGDKHANNA  60
WTDAETLLLL EAVLKHGDDW DLIAQHVRTK NKLDCIARLI HLPFGEHMLG PIRNKLDTSR  120
NPVSGVTKEA QYVLKEQLEE TVKEDGEQIT ATNEKKKVTE ESSPEPPTKK RCLASFTDVT  180
DSLMNQVALL STVGGPHVAT AAAEAAIAAL CHENPCALKA FEIDRNDNTN KLGPTMQYET  240
ESYSSNHRFE DQEVKRHKQT ESSPEKSFGA TTFRLRAAIA TSLGATAARA KLLADQEMRE  300
MELLMASIIE MQLKKLKIKM KHFEELELIM EKEYLQVQQL KESILEEWVG ILKQAARAGI  360
PRWKNNGLPK LVMNTNV*