PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1386

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CAMTA

Protein Properties

Length: 1080aa MW: 120610 Da PI: 6.1931

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1386	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	171.2	1.6e-53	4	119	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevl 81 ke + rwlk+ ei+ +L+n+e++ +++e++++p+sgs++Lynr+++ryfrkDG+sw+kkkdg+ v E+he+LKvg+v++l evm.model.AsparagusV1_09.1386 4 KEaRYRWLKPAEIHFVLQNHESYPISAEAPHKPPSGSVFLYNRRVLRYFRKDGHSWRKKKDGRNVGEAHERLKVGNVDAL 83 66699************************************************************************* PP CG-1 82 ycyYahseenptfqrrcywlLeeelekivlvhylev 117 +cyYah+e np fqrr+yw+L+ ++e+ivlvhy+ev evm.model.AsparagusV1_09.1386 84 NCYYAHGEPNPYFQRRSYWMLDPAYEHIVLVHYREV 119 ********************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1080 aa Download sequence
MLCKEARYRW LKPAEIHFVL QNHESYPISA EAPHKPPSGS VFLYNRRVLR YFRKDGHSWR 60 KKKDGRNVGE AHERLKVGNV DALNCYYAHG EPNPYFQRRS YWMLDPAYEH IVLVHYREVS 120 EGRFLSGSIS NISANSHSTF NQTTSTSNTH YQGITSGSEH YDPNGCNGSS TTVEEVSSKF 180 ALGAADADHL HIRYGHGSRN SDLSPQPEVS LALHKLAMQL SLEDDYENTS CFGEKLPEFS 240 KEYDRSQGVG CFDNTRESFQ EADQNLFHGT EFWEQNQIES EKQDGYRSTQ SLGDSGTPET 300 NLTSSHNSLG DNGKQGSQPL GSGYSVVRTS PSWNHMMQTS QYSAPINARN KNTLPPEGII 360 ESSMLRPTEH GPTLDIPFEQ PGQFVWAQAD DVGNNAESRS TRHHIPDSDL SLQLAATREF 420 LLGPENSIES PTYISQLSKV QMQSICDASI CETSSDVGKY RTQNSTDWMA TIDLDVPNNT 480 YSSDFSTMWF DQGQFGIPLR DDSSLTVAEK QRFSIREICP EWAFSSEPTK VILIGDFLCN 540 SSECSWAIMF GNIQVPAEIV QEGILRCMAP QHGDGKVTIC VTSGNRESCS EVREFEFRAK 600 PTTTNFVGTP PKAEGTRNAE EILLLVRLVH ILCGSDVFSC KTGSSKETEH FSTLKDESRW 660 SRIMESLLDG SEGPSSILEW VMEELLKDKL QLWLSSKNQG QDCLLSRKEK GFVHLISGLG 720 YEWALSPILD AGVGVNFRDA SGWTALHWAA RFGRERMVAA LLAAGASAGA VTDPTPLDPI 780 GRTAGALAAE NGHTGLAAYL SEAALTSHLS SLTMGENEIF KGSAEVEAER AVESISQRTV 840 QLHVGVTEDE LSLKDSLAAV RNATQAAARI QAAFRAHSFR KRHQIAASFQ DEYGMTPVDI 900 HRFAASSKFQ RAPHGSRDHK FDKAALSIQK NYRGWKGRKD FLTLRQHVVK IQAHVRGYRE 960 RKKYQFQWTV GVIEKAVLRW RRKGVGLRGY RAEPESVDEG DEEVEEDILK VFRKQKVDAA 1020 VDQAVSRVLS MVESPTARQQ YRRMLERYAE AKAELGTSDE ATSRPNDDFQ ITESNDLMF*

Sequence ? help Back to Top

Protein Sequence Length: 1080 aa Download sequence

MLCKEARYRW LKPAEIHFVL QNHESYPISA EAPHKPPSGS VFLYNRRVLR YFRKDGHSWR  60
KKKDGRNVGE AHERLKVGNV DALNCYYAHG EPNPYFQRRS YWMLDPAYEH IVLVHYREVS  120
EGRFLSGSIS NISANSHSTF NQTTSTSNTH YQGITSGSEH YDPNGCNGSS TTVEEVSSKF  180
ALGAADADHL HIRYGHGSRN SDLSPQPEVS LALHKLAMQL SLEDDYENTS CFGEKLPEFS  240
KEYDRSQGVG CFDNTRESFQ EADQNLFHGT EFWEQNQIES EKQDGYRSTQ SLGDSGTPET  300
NLTSSHNSLG DNGKQGSQPL GSGYSVVRTS PSWNHMMQTS QYSAPINARN KNTLPPEGII  360
ESSMLRPTEH GPTLDIPFEQ PGQFVWAQAD DVGNNAESRS TRHHIPDSDL SLQLAATREF  420
LLGPENSIES PTYISQLSKV QMQSICDASI CETSSDVGKY RTQNSTDWMA TIDLDVPNNT  480
YSSDFSTMWF DQGQFGIPLR DDSSLTVAEK QRFSIREICP EWAFSSEPTK VILIGDFLCN  540
SSECSWAIMF GNIQVPAEIV QEGILRCMAP QHGDGKVTIC VTSGNRESCS EVREFEFRAK  600
PTTTNFVGTP PKAEGTRNAE EILLLVRLVH ILCGSDVFSC KTGSSKETEH FSTLKDESRW  660
SRIMESLLDG SEGPSSILEW VMEELLKDKL QLWLSSKNQG QDCLLSRKEK GFVHLISGLG  720
YEWALSPILD AGVGVNFRDA SGWTALHWAA RFGRERMVAA LLAAGASAGA VTDPTPLDPI  780
GRTAGALAAE NGHTGLAAYL SEAALTSHLS SLTMGENEIF KGSAEVEAER AVESISQRTV  840
QLHVGVTEDE LSLKDSLAAV RNATQAAARI QAAFRAHSFR KRHQIAASFQ DEYGMTPVDI  900
HRFAASSKFQ RAPHGSRDHK FDKAALSIQK NYRGWKGRKD FLTLRQHVVK IQAHVRGYRE  960
RKKYQFQWTV GVIEKAVLRW RRKGVGLRGY RAEPESVDEG DEEVEEDILK VFRKQKVDAA  1020
VDQAVSRVLS MVESPTARQQ YRRMLERYAE AKAELGTSDE ATSRPNDDFQ ITESNDLMF*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-165	CAMTA family protein