PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.135 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 136aa MW: 15474.9 Da PI: 6.2608 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 39.6 | 9.4e-13 | 70 | 132 | 1 | 58 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEE.TTS-EEEEEE..EEETTE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltled.esgrsWevkliyrkksgr 58 f k+ tpsdv+k++rlv+ k++ e+h gg es+ +++ed +g++W+++++y+++s++ evm.model.AsparagusV1_09.135 70 FNKTVTPSDVGKLNRLVIQKQHEERHlpalrdGGR--ESVLVSFEDtADGKVWRFRYSYWNSSQS 132 89****************************86544..899******9999************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
MSYEDFTASL REKECRYAIY DFDFVTEENC QKSNIFFIAS TDNSSNNNND KAATQPDGRG 60 GASMSREHLF NKTVTPSDVG KLNRLVIQKQ HEERHLPALR DGGRESVLVS FEDTADGKVW 120 RFRYSYWNSS QSSKT* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68840.2 | 4e-25 | RAV family protein |