PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_09.1235 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 416aa MW: 47890.3 Da PI: 9.2262 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 56.4 | 5.4e-18 | 9 | 99 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 ffk++ + +s+ l++p f ++++ + +++ + l+ +sg +W v++ k+ +++ +++GWk+Fv ++ L gD ++F evm.model.AsparagusV1_09.1235 9 FFKIF--LPNQSSNSLRIPPAFGDHIEVE--SNRRVYLKGQSGSVWGVNM--VKNCDGFSFEDGWKDFVVDHSLIMGDLLIF 84 88999..66777778********777644..5668***************..****************************** PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 +++g+ +f v vf++ evm.model.AsparagusV1_09.1235 85 RYNGSLRF--EVLVFDS 99 *9886555..8888876 PP | |||||||
2 | B3 | 55.3 | 1.2e-17 | 315 | 403 | 4 | 98 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 v+ s+v +s ++lp f+++h k e+ lt+ d++g++W++++i ++ g+ l++GW +F a++L+ D+++F+ evm.model.AsparagusV1_09.1235 315 VMQDSYVYTSFFMCLPTWFVRKHLPK--ENAVLTVSDPNGKQWKMTYICYNSHGA--LSGGWGKFTYAHNLEKHDVCIFE 390 67889******************533..4569***************87777766..9********************** PP E-SSSEE..EEEEE- CS B3 84 ldgrsefelvvkvfr 98 +++++ +v+++r evm.model.AsparagusV1_09.1235 391 FIDTDHL--KVHIYR 403 9985555..788776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 416 aa Download sequence |
MANSKPHYFF KIFLPNQSSN SLRIPPAFGD HIEVESNRRV YLKGQSGSVW GVNMVKNCDG 60 FSFEDGWKDF VVDHSLIMGD LLIFRYNGSL RFEVLVFDSS ACEKRKAFLA RPSMGEEIED 120 VEETEQSKQE MVKEEEEEEE EDNKPLVHFA KRKFDGNLKK RKKKQFPSYG DQSNSGQPLP 180 KSRDLATPKQ EQVSYSPPSP FKFTKDTQMQ KNGECMHGNS AFHVRRFISN KNLQLRYRSG 240 QVSRCTPHST KGSTSKKSSK SVELVKSDES ACRTGSVYRM RALISQRRPV TTEEVERALQ 300 RALKFQSEHP FAVSVMQDSY VYTSFFMCLP TWFVRKHLPK ENAVLTVSDP NGKQWKMTYI 360 CYNSHGALSG GWGKFTYAHN LEKHDVCIFE FIDTDHLKVH IYRVLEEITP LLRPR* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 159 | 163 | KKRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 6e-18 | B3 family protein |