PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1226

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 231aa MW: 25530.1 Da PI: 5.6039

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1226	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.6	1.6e-09	22	56	22	48
T.......-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 22 g.......tWktIartmg.kgRtlkqcksrwqkyl 48 + t+ktI r m+ g+tl+++ks++qky+ evm.model.AsparagusV1_09.1226 22 DwqqpgeaTPKTILRLMNiRGLTLYHLKSHLQKYR 56 255555669*************************7 PP
2	G2-like	50.9	3.4e-16	28	57	26	55
G2-like 26 kAtPktilelmkvkgLtlehvkSHLQkYRl 55 +AtPktil+lm++ gLtl+h+kSHLQkYRl evm.model.AsparagusV1_09.1226 28 EATPKTILRLMNIRGLTLYHLKSHLQKYRL 57 7****************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MKPDAILFFI LSLDGSGGNG NDWQQPGEAT PKTILRLMNI RGLTLYHLKS HLQKYRLGKQ 60 SCKELIDNSS DASGAAETQS AKPSAPPSSI LIAEELNDGC NEAMRVQMEL QRRLHEQLEV 120 QRHIQVRIEA QDKYLQSILE RACNILIDPD LVATEHESIT HDIFELSTRE IYGCANFQCE 180 SLKMPSLAEM TVACLPQITE CSVDSCLTST ESPAKVSALK KRPHPLLGTN *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	9e-59	G2-like family protein