PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_09.1218
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 296aa    MW: 33603.8 Da    PI: 6.8647
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_09.1218genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.79.5e-21110160256
                            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                                     y+GVr+++ +g+WvAeIr p++   r+r++lg+f+tae+Aa a++ a+ kl+ge
  evm.model.AsparagusV1_09.1218 110 LYRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEDAAMAYDMAAYKLRGE 160
                                    59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MDGSDHHSVL NFLNPDESIG RPNIFNGTVL KPNFSMFPHE DPRVDPSNLQ MDLQMYQKLQ  60
EPDFSDWLQL SNHLKSDNPI SPAKLKILEI NSNVVNNRIN HQQQQQSTKL YRGVRQRHWG  120
KWVAEIRLPR NRTRVWLGTF DTAEDAAMAY DMAAYKLRGE FAQLNFPHLK HKLHEAVARG  180
SQSPTISLLE AKLKSFQESA TSSSSSEKDL LQNVGREPTP VAKKQRRSEE EIIKKEVECL  240
SNKFEGKQMT SAGEIDEVLL SRIPSLDMDS IWDSLHIATA DSCNYYSYLF SGSGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.15e-37ERF family protein