PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_09.1003

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 480aa MW: 50491.6 Da PI: 8.6569

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_09.1003	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	28.4	3.8e-09	204	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r+ WT+eEd l+ av++ G g+W+ I + +Rt+ q+ rw evm.model.AsparagusV1_09.1003 204 RQLWTKEEDMELIAAVQKCGEGNWANILKGDFkHNRTASQLSQRW 248 788************************984334899999999998 PP

Sequence ? help Back to Top
Protein Sequence Length: 480 aa Download sequence
MTEALKKRKR SEEDVTELLQ RYNAPAILSL LQEVSEYTTK HSDCVKIDWN ALVKTTSTGI 60 SSAREYQMLW RHLAYHNPLL EKIEDETEPL DDDSDLEFEL EAVPALSTEE LAEAKECAKI 120 ILSSGSPLIC GSTLRPAAET SSNADTPNEQ ALLDHSEKLP GSTSGGHTVL PASNQKSSLS 180 IGPSVEGLDA NGAGSSGLPA KKKRQLWTKE EDMELIAAVQ KCGEGNWANI LKGDFKHNRT 240 ASQLSQRWAL IRKRLGTSNT SNGNKTNSST RSEERLAAQK AFSLAVDMPM TGGISSIFSG 300 STQVGNSSTS SAATSQASRA CAAQSLNQSQ DKGTSSLLLK ARPPPMKKPG IPGKPLVGPN 360 PLIQAAAFAA GGRIANPSTA ASLFKAAQSK NAVHIRPGIG SLPMSSAMAS KPSSISNSSA 420 PQSTLNPIPA RPASFGTTLS SQRSSQPASP LTSCTTSADS KSEAVQGPNL LCYFGGRVS*

Sequence ? help Back to Top

Protein Sequence Length: 480 aa Download sequence

MTEALKKRKR SEEDVTELLQ RYNAPAILSL LQEVSEYTTK HSDCVKIDWN ALVKTTSTGI  60
SSAREYQMLW RHLAYHNPLL EKIEDETEPL DDDSDLEFEL EAVPALSTEE LAEAKECAKI  120
ILSSGSPLIC GSTLRPAAET SSNADTPNEQ ALLDHSEKLP GSTSGGHTVL PASNQKSSLS  180
IGPSVEGLDA NGAGSSGLPA KKKRQLWTKE EDMELIAAVQ KCGEGNWANI LKGDFKHNRT  240
ASQLSQRWAL IRKRLGTSNT SNGNKTNSST RSEERLAAQK AFSLAVDMPM TGGISSIFSG  300
STQVGNSSTS SAATSQASRA CAAQSLNQSQ DKGTSSLLLK ARPPPMKKPG IPGKPLVGPN  360
PLIQAAAFAA GGRIANPSTA ASLFKAAQSK NAVHIRPGIG SLPMSSAMAS KPSSISNSSA  420
PQSTLNPIPA RPASFGTTLS SQRSSQPASP LTSCTTSADS KSEAVQGPNL LCYFGGRVS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	6	11	KKRKRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	2e-52	MYB_related family protein