PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.983
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 356aa    MW: 38452.7 Da    PI: 6.8498
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.983genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.35.1e-33214270158
                     CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                   +ep+YVNaKQy++Il+RRq+Rak+e ekk+ +ksrkpylheSRh+hA+rR+Rg+gGrF
  evm.model.AsparagusV1_08.983 214 EEPVYVNAKQYHGILRRRQSRAKAELEKKV-IKSRKPYLHESRHQHAMRRARGCGGRF 270
                                   69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MGNWVKSLTE GVIGNEVNIS GHGGQLVVLQ VQGQETEEVV NGVGNVDQTI AVEVQDLIME  60
SRTDGADTGE INAQGAVPST ITSHPWWHGP GFGATVIPGN ATKATIDQSQ LHGDVNEGRD  120
ASKEVQKIRN GSDASFGSEQ HNLQPVSSTV SPMMPEYLVP HTQLEMGQTI ACPPYSYTDP  180
YAGMMTPYGP QALMHPQLLG LPHTRMPLPL EMAEEPVYVN AKQYHGILRR RQSRAKAELE  240
KKVIKSRKPY LHESRHQHAM RRARGCGGRF LNTKKTDSAP DGANSSASNQ QTQSASSSGS  300
EPLPSDSSAN PTSSTPTTTQ TQSFYEPQQH SGYQLSSFRS SQGERMPPNR AVAIK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.24e-46NF-YA family protein