PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.8

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

DBB

Protein Properties

Length: 199aa MW: 21982.8 Da PI: 6.5819

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.8	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.7	9.7e-08	3	33	4	34
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeH 34 ++C+ +e+ + lfC ++ lC++C ++ H evm.model.AsparagusV1_08.8 3 TICDVCESAAAVLFCAADEAALCRSCDDKVH 33 68*************************9998 PP
2	zf-B_box	25.9	2e-08	52	91	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....H 37 e ++C+ +e+ ++ ++C +++ lC +C + H g H evm.model.AsparagusV1_08.8 52 EVPRCDICENAPAFFYCDIDGTSLCLQCDMIVHVGgkrtH 91 789***************************9996545555 PP

Sequence ? help Back to Top
Protein Sequence Length: 199 aa Download sequence
MRTICDVCES AAAVLFCAAD EAALCRSCDD KVHMCNKLAS RHVRVGLADP SEVPRCDICE 60 NAPAFFYCDI DGTSLCLQCD MIVHVGGKRT HGRYLLLRQR VEFHGDKQGH VENVAMQSNE 120 QVENRKDQNH VAKLMMIENM QNHKVPAATP LDVNGDDHGK IDTKMIDLNT RPYRNLGQAS 180 NSRSQSMDYL SGSNNNGS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38960.1	1e-73	DBB family protein