PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.770
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 621aa    MW: 68113.6 Da    PI: 6.2851
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.770genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like87.21.6e-27197250155
                       G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                   k+r++W+ +LH++F+ av++L G++kA+Pk+il+lm+v+gLt+e+v+SHLQkYRl
  evm.model.AsparagusV1_08.770 197 KARVVWSVDLHRKFMAAVNHL-GINKAVPKRILDLMNVDGLTRENVASHLQKYRL 250
                                   68*******************.********************************8 PP
2Myb_DNA-binding32.91.5e-10199249148
                                   TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                   r  W+ +++ ++  av+ lG +   +k+I   m+  g+t++++ s++qky+
  evm.model.AsparagusV1_08.770 199 RVVWSVDLHRKFMAAVNHLGINkaVPKRILDLMNvDGLTRENVASHLQKYR 249
                                   678***********************************************7 PP
3Response_reg78.52.4e-26191271109
                                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEES CS
                  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvta 79 
                                   vl vdD+++ +++l+ +l++ +y +v+ + ++ +al++l+e++  +Dli++D+ mp+mdG++ll+     e++lp+i+++a
  evm.model.AsparagusV1_08.770  19 VLAVDDDQTCLKVLEAMLRQCKY-HVTITNQAVKALKMLRENKdkFDLIITDVHMPDMDGFKLLELVGL-EMDLPVIMLSA 97 
                                   799********************.***************888888*******************87754.558******** PP

                                   TTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                  Response_reg  80 hgeeedalealkaGakdflsKpfdpeelvk 109
                                   +g+ + + + +  Ga d+l Kp+ +eel +
  evm.model.AsparagusV1_08.770  98 NGDTKAVMKGITHGACDYLLKPVRMEELKN 127
                                   ***************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 621 aa     Download sequence    
MTVEAMGEER DEFPVGMRVL AVDDDQTCLK VLEAMLRQCK YHVTITNQAV KALKMLRENK  60
DKFDLIITDV HMPDMDGFKL LELVGLEMDL PVIMLSANGD TKAVMKGITH GACDYLLKPV  120
RMEELKNIWQ HVIRKKKSVP REHNNSDKGP SEAGQGSVNS ESSDHKVNRK RKDQNEEEED  180
EDEENVNESE NSSQQKKARV VWSVDLHRKF MAAVNHLGIN KAVPKRILDL MNVDGLTREN  240
VASHLQKYRL YLKKVASQEA NIAAAFGVRD SYLPLATVDT FGDFHSFASS SPLTSLPSLQ  300
QNAGFSRKAP SVFGHNSISP GLVQARRMQN TINPISDLST GNQHGNLPQS TSATLGLNQI  360
QQQNNRFPGT FPAGGMGTCS SNISIGSVIN NPQILPTNYS PRGLSSTGPF QVNSGVLSNV  420
LDSVRCNDTW QSPIPAIPLT SSANTLPMSS SVSTVVSQLS DNSTFSPSGT MMTPQSNAVI  480
GNMMLMLKGA NQDSSKYLNF ESMGNGQQQN HELNITFSSS LNPSMAAQSI VDNASHSQRL  540
GNGMYRKNAV NNMSGLTNYG NMFLSQECKN DKSMADGQLK DGYCLENSTL QGGLSLNGYN  600
FDELENMIKP EREDTLFWDG *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-110ARR-B family protein