PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.757 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 373aa MW: 41637.8 Da PI: 8.6806 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 77.3 | 1.5e-24 | 21 | 86 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++f++l+++ + + ++l+++ak+L v +rRRiYDi+NVLe+++++++k+kn+++w+g evm.model.AsparagusV1_08.757 21 RKQKSLGLLCSNFVSLYNRDDVESISLDDAAKKL---GV--ERRRIYDIVNVLESVGVLARKAKNRYSWIG 86 79*****************999************...**..****************************98 PP | |||||||
2 | E2F_TDP | 73.7 | 2e-23 | 147 | 231 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....keknei 67 r+eksL++lt++f+kl+ +se ++++l+e+ak L+ e + k+RR+YDi+NVL++lnliek ++k+++ evm.model.AsparagusV1_08.757 147 RREKSLGMLTENFVKLFLTSEVDTISLDEAAKILLGEvhdpsqpksNNAAKVRRLYDIANVLSSLNLIEKthhseTRKPAF 227 689*******************************************7778*********************99999***** PP E2F_TDP 68 rwkg 71 rw g evm.model.AsparagusV1_08.757 228 RWLG 231 **87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 373 aa Download sequence |
MSSSSSIFLE SGGGLTHAYS RKQKSLGLLC SNFVSLYNRD DVESISLDDA AKKLGVERRR 60 IYDIVNVLES VGVLARKAKN RYSWIGFSGI PKALELLKEE ALRENSGSAT EPKSLNVEDV 120 EDDEDDKSLD QSGDSNSLKG KPAPENRREK SLGMLTENFV KLFLTSEVDT ISLDEAAKIL 180 LGEVHDPSQP KSNNAAKVRR LYDIANVLSS LNLIEKTHHS ETRKPAFRWL GLNGKRSAAI 240 AVPSSPKQGH KRAFGMDITN ADLAKRSKSI SYADKKPCKV YKKHDDLKEC NLAVQRQLQT 300 SKGYVFGPFS PAVLPKREES IEERGKEAYN WETMASSFRP DYHNQALSDL FSHYLEAWKS 360 WYAEITQATD NR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48160.2 | 1e-103 | E2F/DP family protein |