PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.757
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family E2F/DP
Protein Properties Length: 373aa    MW: 41637.8 Da    PI: 8.6806
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.757genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP77.31.5e-242186171
                       E2F_TDP  1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
                                  rk+ksL+ll+++f++l+++ + + ++l+++ak+L    v  +rRRiYDi+NVLe+++++++k+kn+++w+g
  evm.model.AsparagusV1_08.757 21 RKQKSLGLLCSNFVSLYNRDDVESISLDDAAKKL---GV--ERRRIYDIVNVLESVGVLARKAKNRYSWIG 86
                                  79*****************999************...**..****************************98 PP

2E2F_TDP73.72e-23147231171
                       E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvse.........dvknkrRRiYDilNVLealnliek.....keknei 67 
                                   r+eksL++lt++f+kl+ +se ++++l+e+ak L+ e         +   k+RR+YDi+NVL++lnliek     ++k+++
  evm.model.AsparagusV1_08.757 147 RREKSLGMLTENFVKLFLTSEVDTISLDEAAKILLGEvhdpsqpksNNAAKVRRLYDIANVLSSLNLIEKthhseTRKPAF 227
                                   689*******************************************7778*********************99999***** PP

                       E2F_TDP  68 rwkg 71 
                                   rw g
  evm.model.AsparagusV1_08.757 228 RWLG 231
                                   **87 PP

Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MSSSSSIFLE SGGGLTHAYS RKQKSLGLLC SNFVSLYNRD DVESISLDDA AKKLGVERRR  60
IYDIVNVLES VGVLARKAKN RYSWIGFSGI PKALELLKEE ALRENSGSAT EPKSLNVEDV  120
EDDEDDKSLD QSGDSNSLKG KPAPENRREK SLGMLTENFV KLFLTSEVDT ISLDEAAKIL  180
LGEVHDPSQP KSNNAAKVRR LYDIANVLSS LNLIEKTHHS ETRKPAFRWL GLNGKRSAAI  240
AVPSSPKQGH KRAFGMDITN ADLAKRSKSI SYADKKPCKV YKKHDDLKEC NLAVQRQLQT  300
SKGYVFGPFS PAVLPKREES IEERGKEAYN WETMASSFRP DYHNQALSDL FSHYLEAWKS  360
WYAEITQATD NR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48160.21e-103E2F/DP family protein