PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.552

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 492aa MW: 53833.1 Da PI: 7.9436

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.552	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	93.3	1.8e-29	181	240	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK+ kg+++pr+Y+rCt + gCpv+k+v+r+ +d +++++tYeg+Hnh+ evm.model.AsparagusV1_08.552 181 MNDGCQWRKYGQKVSKGNPCPRAYFRCTVKaGCPVRKQVQRCIDDMSILITTYEGTHNHP 240 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
VGGETMTSNK KFQKDSCHEP LEDQLASTRI KIGEVKEENE RLKTILARIM KEYQSLQMHC 60 FNIVQQDNSQ VKNPVEQEPH ELVKLSLSTS STEIKKYKKD IEYSENEYEM NQGLTLGLEY 120 QHKSESVPAS SLSPDSSSFD KLKEEEKLKN VISENDDQIA PQSNAKRARV SVRARCEAPT 180 MNDGCQWRKY GQKVSKGNPC PRAYFRCTVK AGCPVRKQVQ RCIDDMSILI TTYEGTHNHP 240 LPLAATAIAS TTSAAASILT SGPTPPGPTA TSSSQLYFSN QFMSTPPSYS SSHPTITLDL 300 TSQSNSFSTM YPHPMQNYWQ RSAYNNPSSS TDIIAKAITS DPSFQSVVAA AISSYVGGQG 360 GQGNELQGSS YSGGGSSMMF RSVDRHCLNN LGRCLHPHLR PHPSWAYRHL IKPTLLLKPI 420 HESAYNNPSS STDIIAKAIT SDPSFQSVVA AAISSYVGGQ GGQGNELQGS SYSGGGSSMM 480 FRSVDKREHN E*

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

VGGETMTSNK KFQKDSCHEP LEDQLASTRI KIGEVKEENE RLKTILARIM KEYQSLQMHC  60
FNIVQQDNSQ VKNPVEQEPH ELVKLSLSTS STEIKKYKKD IEYSENEYEM NQGLTLGLEY  120
QHKSESVPAS SLSPDSSSFD KLKEEEKLKN VISENDDQIA PQSNAKRARV SVRARCEAPT  180
MNDGCQWRKY GQKVSKGNPC PRAYFRCTVK AGCPVRKQVQ RCIDDMSILI TTYEGTHNHP  240
LPLAATAIAS TTSAAASILT SGPTPPGPTA TSSSQLYFSN QFMSTPPSYS SSHPTITLDL  300
TSQSNSFSTM YPHPMQNYWQ RSAYNNPSSS TDIIAKAITS DPSFQSVVAA AISSYVGGQG  360
GQGNELQGSS YSGGGSSMMF RSVDRHCLNN LGRCLHPHLR PHPSWAYRHL IKPTLLLKPI  420
HESAYNNPSS STDIIAKAIT SDPSFQSVVA AAISSYVGGQ GGQGNELQGS SYSGGGSSMM  480
FRSVDKREHN E*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-55	WRKY family protein