PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.517
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family B3
Protein Properties Length: 266aa    MW: 30116.2 Da    PI: 5.6655
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.517genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.61.1e-1875174298
                                   EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT CS
                            B3   2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkeg 77 
                                   +k+l++sdv+++gr+vlpk+ ae+h   ++ +es+ l + d e+++ W++k++y  ++ks++y+l+  + +Fvk ++L++g
  evm.model.AsparagusV1_08.517  75 QKELKNSDVGSLGRIVLPKREAEAHlpVLNVRESFSLPMFDmETSQLWTFKYRYwpNNKSRMYILE-STGDFVKTHNLQVG 154
                                   799************************777789999999998999*********887888888888.9************* PP

                                   -EEEEEE-SSSEE..EEEEE- CS
                            B3  78 DfvvFkldgrsefelvvkvfr 98 
                                   Df++++  ++++ ++ +++++
  evm.model.AsparagusV1_08.517 155 DFIMLYK-DDEGDRYIIRARK 174
                                   ******3.3377777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MAQKCSNPLS VPDLSVEASF GSSALRRKRT GMRQRRQHVT SGLHHLQPTR ETILDLNSKA  60
LDPDHLGESV RFLLQKELKN SDVGSLGRIV LPKREAEAHL PVLNVRESFS LPMFDMETSQ  120
LWTFKYRYWP NNKSRMYILE STGDFVKTHN LQVGDFIMLY KDDEGDRYII RARKARAQEP  180
AMAPPIEDEI FDSIVPDIVV TSARYSDLFL PWTDGMNMAF GLNYAFSEDF PLSFPDEMFG  240
NSSTASAEST TKLGFIQNLS LDDLP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.11e-46B3 family protein