PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.489
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 275aa    MW: 31548.8 Da    PI: 8.397
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.489genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.72.3e-07134174445
                                   S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
               Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                                   WT+eE ++l d+++++  + +  Ia +++  R+ +++ksr++
  evm.model.AsparagusV1_08.489 134 WTKEETDQLFDLCERFDLR-FVVIADRFPSARSVEELKSRYY 174
                                   *******************.*********99**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDAKDILGLP KNSFPSSQEK KPRAPKESQR KPDGVSREVY ALTGGNLPPL MPTVDISHFK  60
RRVQNPDNKE KITWQWLPFS SSARTDNLQL YHWVRVVNGV PPTGDYLFAK YNKKVDVLKY  120
TDEEYDKHLI DPGWTKEETD QLFDLCERFD LRFVVIADRF PSARSVEELK SRYYAVSRAL  180
LLARAPSPGD VSGHPLVKES YNMAHEIERK RALSALFSQT KQQERRDAEI LAEAKRITEL  240
RMSSKANEDA ESPINTTVLE FMEKTFSHHL LLDL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47210.11e-118MYB_related family protein