PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.468
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 452aa    MW: 51498.5 Da    PI: 5.1514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.468genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.3e-10258306255
                                   HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   r  h   Er+RR+++N +f  Lr llP++      K +Ka++L ++ +Y+k L+
  evm.model.AsparagusV1_08.468 258 RLQHTLSERKRREKLNGSFYSLRLLLPPS-----SKKDKASVLYRTKDYLKTLE 306
                                   7789***********************98.....699**************985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MNADHWMPIN LGSCLHINRG SDFTYKEEDR FELEDSAPVN SISMQLPQQL YQASQFAGCE  60
SEVIEFGLSA FNNIYMQMDM DQLSEELDEF FPSEQCSSPS SSQQSLSIKS QEQTSLLKNA  120
STCSVPDTQR TQTNTYFIQP CLSSIQAYDQ FQDIKYPTMK NEDMIITRAL SAIFSSNSNS  180
SLTCSILDQS LRRDKTNRSL VTCFSDFKPY NSAIPLMTES KKRSCGQKMI KDSITYLRKI  240
NLMREEAADE ELRPSSHRLQ HTLSERKRRE KLNGSFYSLR LLLPPSSKKD KASVLYRTKD  300
YLKTLEAQIF ELEKKNQMLE TLLLPTDETE ADVNTNRSLC SKHVQITEAF EPITGIRRMN  360
LKITVNLECD LLKLILHALE YLKETGVVSL VEIDANTNLQ QMVQFTLVTL KFDIKESDWD  420
EVSFKKGMTK AVDNAIMSPQ YLAGNETLSK A*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265270ERKRRE
2266271RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56960.12e-17bHLH family protein