PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.468 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 452aa MW: 51498.5 Da PI: 5.1514 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 31.9 | 2.3e-10 | 258 | 306 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r h Er+RR+++N +f Lr llP++ K +Ka++L ++ +Y+k L+ evm.model.AsparagusV1_08.468 258 RLQHTLSERKRREKLNGSFYSLRLLLPPS-----SKKDKASVLYRTKDYLKTLE 306 7789***********************98.....699**************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 452 aa Download sequence |
MNADHWMPIN LGSCLHINRG SDFTYKEEDR FELEDSAPVN SISMQLPQQL YQASQFAGCE 60 SEVIEFGLSA FNNIYMQMDM DQLSEELDEF FPSEQCSSPS SSQQSLSIKS QEQTSLLKNA 120 STCSVPDTQR TQTNTYFIQP CLSSIQAYDQ FQDIKYPTMK NEDMIITRAL SAIFSSNSNS 180 SLTCSILDQS LRRDKTNRSL VTCFSDFKPY NSAIPLMTES KKRSCGQKMI KDSITYLRKI 240 NLMREEAADE ELRPSSHRLQ HTLSERKRRE KLNGSFYSLR LLLPPSSKKD KASVLYRTKD 300 YLKTLEAQIF ELEKKNQMLE TLLLPTDETE ADVNTNRSLC SKHVQITEAF EPITGIRRMN 360 LKITVNLECD LLKLILHALE YLKETGVVSL VEIDANTNLQ QMVQFTLVTL KFDIKESDWD 420 EVSFKKGMTK AVDNAIMSPQ YLAGNETLSK A* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 270 | ERKRRE |
2 | 266 | 271 | RKRREK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 2e-17 | bHLH family protein |