PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3613 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 175aa MW: 19872 Da PI: 4.9251 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.5 | 1.5e-08 | 3 | 26 | 22 | 46 |
T-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 22 gtWktIartmgkgRtlkqcksrwqk 46 ++W+ Ia+ ++ gRt+++++++w++ evm.model.AsparagusV1_08.3613 3 NRWSIIAAQLP-GRTDNDIRNYWNT 26 45*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MNNRWSIIAA QLPGRTDNDI RNYWNTRLKK KLLGPPLKET SRFSSQQPKP NSQTLTLNST 60 ALERMQLHYF LFQGINNINT FSFYNNPALW SKLHPLGATN NDSLIPIKNT ENEPSHNQPA 120 VTAGSKDQDS CETSSNFNLM QAELNDLFYA FDEEAISSSS WDLVFQDYET GYDL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57620.1 | 7e-19 | MYB family protein |