PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.3343

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 278aa MW: 31046.7 Da PI: 6.2845

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.3343	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	71	1.7e-22	105	167	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSS..TTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaed..pkvveitYegeHnhe 59 +Dg++WrKYGqK++++s++prsYYrCt++ gC ++k++++++ d ++++++Y+++H+++ evm.model.AsparagusV1_08.3343 105 HDGHQWRKYGQKMIHNSKHPRSYYRCTYRdeqGCLATKQIQQEECDdyYQLFKVIYNNQHTCN 167 7*************************99999***99876623599********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 278 aa Download sequence
MASQSSMRRA IREISRGKML INLLHSHLKL HSTEATDLTE GVQRALASAL SILEHKESTA 60 DAAIVSGKKR RAVAGSSGDD REERVQKKKK PMNNSRTIVT PAPHHDGHQW RKYGQKMIHN 120 SKHPRSYYRC TYRDEQGCLA TKQIQQEECD DYYQLFKVIY NNQHTCNPPM LDTTPQIILN 180 SSSKESNLLI FEPKDSYTES SNTSKPNSLG SLDPVIDLSE ENLSSLSENC SSLIEENIEE 240 DMGNAHLLNV LPIPSWSTSD SCGFDLDDID SILSLLG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	68	90	KKRRAVAGSSGDDREERVQKKKK
2	69	91	KKRRAVAGSSGDDREERVQKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46400.1	2e-25	WRKY family protein