PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.334
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 276aa    MW: 30173.9 Da    PI: 9.7453
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.334genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-144389147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  r +WT+eE+++++ + ++lG+g+W+ I+r++  +Rt+ q+ s+ qky
  evm.model.AsparagusV1_08.334 43 RVPWTEEEHKRFLLGLQKLGKGDWRGISRKFVITRTPTQVASHAQKY 89
                                  789*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 276 aa     Download sequence    
MAAAEKSASS AGISAGYRRP KEAGGGVAAD DCRGRRAGEG WVRVPWTEEE HKRFLLGLQK  60
LGKGDWRGIS RKFVITRTPT QVASHAQKYF VRQDNRNRRK RRSSLFDMVP EFGNAQTFPV  120
GIQETKGQSS NPISTPSPLG VEHEPINPNS IDLVPSPQPP KPETTQFPCT VMWPYPYFPF  180
SYPFWPCYQA DATVDKVHSI VKPTAVHYKA PINVNDIVGI SNLSLGEEVG RMSSSSMPIN  240
PLGGSDRHSA FRTNNPEANS SEINSSSSPA PIHAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.14e-31MYB_related family protein