PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.330 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 159aa MW: 17739.2 Da PI: 9.9132 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 40.1 | 6.2e-13 | 50 | 78 | 28 | 56 |
HHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 28 eereeLAkklgLterqVkvWFqNrRakek 56 ++++ LAk+l+L rqV vWFqNrRa+ k evm.model.AsparagusV1_08.330 50 KQKQALAKQLNLRPRQVEVWFQNRRARTK 78 799************************98 PP | |||||||
2 | HD-ZIP_I/II | 90.4 | 2.2e-29 | 49 | 114 | 26 | 92 |
HD-ZIP_I/II 26 perKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ++K++la++L+l+prqv+vWFqnrRARtk+kq+E+++e+Lkr++++l+een+rL+kev eLr +lk evm.model.AsparagusV1_08.330 49 GKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVECEYLKRWCQKLAEENKRLQKEVGELR-ALK 114 589***********************************************************9.555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MAAESEDLRL SLSLSSSQSF FPLKLTLFPS SNGPSKARFV NGEVEEDAGK QKQALAKQLN 60 LRPRQVEVWF QNRRARTKLK QTEVECEYLK RWCQKLAEEN KRLQKEVGEL RALKSVSPRL 120 QTNAAPPTTL SMCPSCESTT PSAPALNPWS SYFFTGAS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 73 | 81 | RRARTKLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44910.1 | 7e-44 | HD-ZIP family protein |