PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.3045 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 178aa MW: 20193.2 Da PI: 8.5164 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.5 | 1.2e-13 | 5 | 51 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+E+rRR+ri+s +++Lr++l + +K +Ka+ L kAv+++++L evm.model.AsparagusV1_08.3045 5 KNHREAEKRRRERIKSHLDRLRTILACD-----PKTDKASLLAKAVDHVRDL 51 78************************98.....7****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MLASKNHREA EKRRRERIKS HLDRLRTILA CDPKTDKASL LAKAVDHVRD LRQRTAEISD 60 TRLFPSETDE IIVLPGTDGR VPVFEASVCC DDRIDLLPEI IETLRSLRMR TLRAEIATLG 120 GRVRNVMVLA REKEEEEEES GDVGLLKEAL VALVNRSRSP DRSKRRRVMD PTEVAMV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 164 | 168 | KRRRV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 1e-41 | bHLH family protein |