PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2758
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 345aa    MW: 37941.7 Da    PI: 6.2665
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2758genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like98.64.3e-31169223155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    k+r+rW+++LH++Fve v+ LGG++kAtPk il+lm+ +gLt++hvkSHLQkYR+
  evm.model.AsparagusV1_08.2758 169 KTRIRWSQDLHAKFVESVNILGGADKATPKGILKLMNSEGLTIYHVKSHLQKYRS 223
                                    68****************************************************7 PP

2Myb_DNA-binding44.73.1e-14173222348
                                    SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    rW+++++ ++v+ v+ lGg    t+k I + m+ +g+t +++ks++qky+
  evm.model.AsparagusV1_08.2758 173 RWSQDLHAKFVESVNILGGAdkaTPKGILKLMNsEGLTIYHVKSHLQKYR 222
                                    9*****************99*****************************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
MNTNKVRPHL CNLRSSSDAQ FELVNSSCGN VSSKERWTPL KHTQKNIGDS IGSYMQSEAA  60
SSSLAFMLPS LSNSGAKCVG STLDAFYAAE RLMGFPNFGE GTLESLVKLP VQGGCNSMVF  120
DDAQRFPDGS PQNCFVVCDP LNSLVNDPSL QSENDKGLSK ISTVVAPNKT RIRWSQDLHA  180
KFVESVNILG GADKATPKGI LKLMNSEGLT IYHVKSHLQK YRSAKFLPES SLGKADRRAS  240
TSEAEQIDPK TGLQITETLR MQLEVQRSLH EQLEVQRKLQ IRIEEQGKKL QKMFEEQLKA  300
NGSTFEQENS ETLAPNEDTV SLEDDQILIP EEGSRNTNSP SKIS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06800.11e-61G2-like family protein