PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2758 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 345aa MW: 37941.7 Da PI: 6.2665 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 98.6 | 4.3e-31 | 169 | 223 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rW+++LH++Fve v+ LGG++kAtPk il+lm+ +gLt++hvkSHLQkYR+ evm.model.AsparagusV1_08.2758 169 KTRIRWSQDLHAKFVESVNILGGADKATPKGILKLMNSEGLTIYHVKSHLQKYRS 223 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 44.7 | 3.1e-14 | 173 | 222 | 3 | 48 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW+++++ ++v+ v+ lGg t+k I + m+ +g+t +++ks++qky+ evm.model.AsparagusV1_08.2758 173 RWSQDLHAKFVESVNILGGAdkaTPKGILKLMNsEGLTIYHVKSHLQKYR 222 9*****************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 345 aa Download sequence |
MNTNKVRPHL CNLRSSSDAQ FELVNSSCGN VSSKERWTPL KHTQKNIGDS IGSYMQSEAA 60 SSSLAFMLPS LSNSGAKCVG STLDAFYAAE RLMGFPNFGE GTLESLVKLP VQGGCNSMVF 120 DDAQRFPDGS PQNCFVVCDP LNSLVNDPSL QSENDKGLSK ISTVVAPNKT RIRWSQDLHA 180 KFVESVNILG GADKATPKGI LKLMNSEGLT IYHVKSHLQK YRSAKFLPES SLGKADRRAS 240 TSEAEQIDPK TGLQITETLR MQLEVQRSLH EQLEVQRKLQ IRIEEQGKKL QKMFEEQLKA 300 NGSTFEQENS ETLAPNEDTV SLEDDQILIP EEGSRNTNSP SKIS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06800.1 | 1e-61 | G2-like family protein |