PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2735 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 612aa MW: 67456.9 Da PI: 7.7685 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 26.1 | 2e-08 | 496 | 543 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 +WT E ++lv++v+++G g+W+ I + Rt ++k++w+++ evm.model.AsparagusV1_08.2735 496 AWTLSEVLRLVEGVARYGAGRWSVIRQVAFasySYRTSVDLKDKWRNL 543 7*************************999999999***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 612 aa Download sequence |
MGALIEAEGN EVTGVEKNRA DKICASNPVV YQLVRVGVDG KLVPATDDEL MEVEHLLKDD 60 RRQLQSVVAE KGTEQCPSSE LLLPKTSNLE GLSLCAGVEV DPEKLNDRLK DKGLQLKCES 120 VSHSPKDVTV GGESSDGISH SKSCDDNFRP GKTSAGTDAS VSCLNVKEPA QFESSETVTE 180 PASDAVASIS SISESHTSSD PDFSILKGEL CLDNLTIREL QKVFRATFGR QTSVKDKLWL 240 KRRITMGLTN SCEVPTTSIV IKDNKVVHVK GKEEPCSTQQ VTSETGSLAH NQMSNPVNDR 300 VGDSPSKPID QMKDEQVLLG KRLRKPPPEH DMMDENIQIE HSANKRIRKP TKRYIEELSD 360 VETRDSTGRL VSSVKDSERH QLSLKPQVKP LHDIGSRGKT FVTRKDSIGG CGIQIPYVSR 420 MRRGKPRKDL YALTKFGGIE SDRRDTETSY SEEEQDPDNE KINPASVTSS DNDADAVHAD 480 KGRTLKVGVK RKHHRAWTLS EVLRLVEGVA RYGAGRWSVI RQVAFASYSY RTSVDLKDKW 540 RNLIKASFAQ YPSDQGAKNF RKPTSVPIPS SILMRVRELA ELHSQSGIEF GPGKFAGHGR 600 EIVQEKGSGF L* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 421 | 428 | MRRGKPRK |
2 | 422 | 429 | RRGKPRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72650.2 | 6e-84 | MYB_related family protein |