PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2735
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 612aa    MW: 67456.9 Da    PI: 7.7685
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2735genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.12e-08496543347
                                    SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
                Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                                    +WT  E ++lv++v+++G g+W+ I +        Rt  ++k++w+++
  evm.model.AsparagusV1_08.2735 496 AWTLSEVLRLVEGVARYGAGRWSVIRQVAFasySYRTSVDLKDKWRNL 543
                                    7*************************999999999***********97 PP

Sequence ? help Back to Top
Protein Sequence    Length: 612 aa     Download sequence    
MGALIEAEGN EVTGVEKNRA DKICASNPVV YQLVRVGVDG KLVPATDDEL MEVEHLLKDD  60
RRQLQSVVAE KGTEQCPSSE LLLPKTSNLE GLSLCAGVEV DPEKLNDRLK DKGLQLKCES  120
VSHSPKDVTV GGESSDGISH SKSCDDNFRP GKTSAGTDAS VSCLNVKEPA QFESSETVTE  180
PASDAVASIS SISESHTSSD PDFSILKGEL CLDNLTIREL QKVFRATFGR QTSVKDKLWL  240
KRRITMGLTN SCEVPTTSIV IKDNKVVHVK GKEEPCSTQQ VTSETGSLAH NQMSNPVNDR  300
VGDSPSKPID QMKDEQVLLG KRLRKPPPEH DMMDENIQIE HSANKRIRKP TKRYIEELSD  360
VETRDSTGRL VSSVKDSERH QLSLKPQVKP LHDIGSRGKT FVTRKDSIGG CGIQIPYVSR  420
MRRGKPRKDL YALTKFGGIE SDRRDTETSY SEEEQDPDNE KINPASVTSS DNDADAVHAD  480
KGRTLKVGVK RKHHRAWTLS EVLRLVEGVA RYGAGRWSVI RQVAFASYSY RTSVDLKDKW  540
RNLIKASFAQ YPSDQGAKNF RKPTSVPIPS SILMRVRELA ELHSQSGIEF GPGKFAGHGR  600
EIVQEKGSGF L*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1421428MRRGKPRK
2422429RRGKPRKD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72650.26e-84MYB_related family protein