PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2650
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ERF
Protein Properties Length: 319aa    MW: 35944.9 Da    PI: 4.3652
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2650genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.53.9e-19104153255
                            AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                    +++G+r+++ +g+W+AeIrdp++     r++lg+f taeeAa+a++a + +++g
  evm.model.AsparagusV1_08.2650 104 QFRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDAEACRIRG 153
                                    69*******.**********954...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    
MCGGAIISDF IPPSRSRKLT TDYLSPNLKK KAKSFEDDED FEADYNEFID EFEKGSEEGP  60
EVVNVKPFEF GPKSALFQEE PISKKIIDLD SPTDWSSKRK RKNQFRGIRQ RPWGKWAAEI  120
RDPRKGVRVW LGTFNTAEEA ARAYDAEACR IRGKKAKVNF PDETPKNSTK TKSSEKPIPN  180
PSLGYLNALE LDFFSDFDFI EEKVQVNPVK SVSPSDQGSN SFEAKTPESN GLDFLEVGGP  240
MKKFKNNFEE GVAAEENNNV VDLSEELSDF ESYMKFLQIP YLEGSSDESV DSLLNNEVTQ  300
DDMGLWSFDD LPIDGSVY*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12834LKKKAKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G53910.31e-51ERF family protein