PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2515
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 333aa    MW: 37147.1 Da    PI: 8.997
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2515genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like106.31.7e-333185155
                        G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                                   kprlrWt eLH+rFv+av+qLGG++kAtPkti+++m+vkgLtl+h+kSHLQk+Rl
  evm.model.AsparagusV1_08.2515 31 KPRLRWTVELHDRFVDAVTQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 85
                                   79****************************************************8 PP
2Myb_DNA-binding711.9e-223384148
                                   TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48
                                   r+rWT e+++++vdav+qlGg+   t+ktI+r mg kg+tl+++ks++qk++
  evm.model.AsparagusV1_08.2515 33 RLRWTVELHDRFVDAVTQLGGPdkaTPKTIMRVMGvKGLTLYHLKSHLQKFR 84
                                   89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MFPSKKPTLN SHERPMCVQG DSGLVLTTDP KPRLRWTVEL HDRFVDAVTQ LGGPDKATPK  60
TIMRVMGVKG LTLYHLKSHL QKFRLGKQPH KEFSDHSVKD ASAFELQRNA ASSSMMGRTM  120
NDRNVHLSEA LRMQMEVQRR LHEQLEVQKH LQMRIEAQGK YMQSILEKAC QTLSSDNMGA  180
SGSFKGIGNQ DLGSPMSFPS LQDLHIYSGD QLDGFFPNDQ TLSLGKKRPN PYSSNEKSPI  240
VWADDLRLQE LGSAEPSKSD QVLQLDSGID LESIGDVYEA KPNFSSDVGE KKFDVSTKLE  300
RPSPRRAPPS MERMNPMMGS GGLNQTRNLS YG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79430.21e-112G2-like family protein