PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2436
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 314aa    MW: 35168.7 Da    PI: 7.4979
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2436genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.54.6e-35211551128
                            NAM   1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkr 73 
                                    lppGfrF+Ptd el+ ++Lk+k+++++ +++      ik++d+y++ePw+Lp+     +++eke+yfFs+r+ ++++ kr
  evm.model.AsparagusV1_08.2436  21 LPPGFRFRPTDRELIGFFLKRKIAASSSSVAAapssLIKDFDVYSTEPWNLPSdsfLSQSDEKEMYFFSPRHPTSTSAKR 100
                                    79**********************9994443333337**************944555566888***************** PP

                            NAM  74 knratksgyWkatgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                                     nr++  g+W  +  d++++  ++e++g k+ L+f  +g+++k ++ dW+mhe++l
  evm.model.AsparagusV1_08.2436 101 VNRTAGCGFWYGSAGDTTIMI-GTEVIGYKTQLTFKtRGKEKKKTNGDWIMHEFHL 155
                                    *********************.99***********977899999999********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MAMAMQPVVD DDLLAMLLQQ LPPGFRFRPT DRELIGFFLK RKIAASSSSV AAAPSSLIKD  60
FDVYSTEPWN LPSDSFLSQS DEKEMYFFSP RHPTSTSAKR VNRTAGCGFW YGSAGDTTIM  120
IGTEVIGYKT QLTFKTRGKE KKKTNGDWIM HEFHLHSSSD DTVFDDMVLC RIYMKKGKKS  180
SQTNEEVDDI PVPAGEQEAV AKGNRVMKRK SADHREMGTY GLVYTKSSEQ NTSSVSKFPP  240
LLSCQESNVQ SNMSWIDVAV FDGKLNVEEE EEGRRMVKRR RVKENGSMVA DYNEKGTSGC  300
EEKAGQGKWF YGS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1278282KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.23e-31NAC family protein