PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.2409 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 266aa MW: 29771.9 Da PI: 8.6759 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.0002 | 103 | 139 | 2 | 39 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-ST CS HLH 2 rrahnerErrRRdriNsafeeLrellPk.askapskKls 39 + + erE+ Rd++N+ f eL +l + + ++++K s evm.model.AsparagusV1_08.2409 103 KIHKAEREKLKRDQLNDLFLELGHVLEPrL--ENNGKAS 139 567889******************999955..5666544 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MHAPARSRAF DLRIDLQKPG LEKSSPSSVA ANAKETDFRE VEPTRGVPCQ PTALFTRPRS 60 PVLFYDLRSS NMMSTECSKD VIPEHPVTGS PSNKKKQGKV PKKIHKAERE KLKRDQLNDL 120 FLELGHVLEP RLENNGKASV LGAASRILRD LIVQVESLRK ENVALMTESS YVTVEKNELK 180 DENITLATEI ARLNVELQER QQSDPIPQPP VTPIYVLPPF HQDLKNMSEA ETAPTTVRKP 240 LARYPTPSDS WPSQILSEAS EKQQH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 2e-40 | bHLH family protein |