PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.2409
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 266aa    MW: 29771.9 Da    PI: 8.6759
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.2409genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.90.0002103139239
                                    HHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-ST CS
                            HLH   2 rrahnerErrRRdriNsafeeLrellPk.askapskKls 39 
                                    +  + erE+  Rd++N+ f eL  +l + +  ++++K s
  evm.model.AsparagusV1_08.2409 103 KIHKAEREKLKRDQLNDLFLELGHVLEPrL--ENNGKAS 139
                                    567889******************999955..5666544 PP

Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MHAPARSRAF DLRIDLQKPG LEKSSPSSVA ANAKETDFRE VEPTRGVPCQ PTALFTRPRS  60
PVLFYDLRSS NMMSTECSKD VIPEHPVTGS PSNKKKQGKV PKKIHKAERE KLKRDQLNDL  120
FLELGHVLEP RLENNGKASV LGAASRILRD LIVQVESLRK ENVALMTESS YVTVEKNELK  180
DENITLATEI ARLNVELQER QQSDPIPQPP VTPIYVLPPF HQDLKNMSEA ETAPTTVRKP  240
LARYPTPSDS WPSQILSEAS EKQQH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.22e-40bHLH family protein