PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.212
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 535aa    MW: 59237.5 Da    PI: 6.6585
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.212genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS314.72e-961765332374
                          GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseela 79 
                                   v++L+++Ae v++g+   a+ +Larl+++       g+p+ R a+yf+eAL    ++      +  ++  +++ ++  +l 
  evm.model.AsparagusV1_08.212 176 VDQLFKAAELVEAGNSIGARGILARLNHQlpsFPVIGKPLFRSAFYFKEALLLLANN------NPPNSPLSTPLDVLLKLG 250
                                   789*************************975333457**************999988......666667777778999*** PP

                          GRAS  80 alklfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeele 159
                                    +k+fse+sPi++f+++t  qaIle+++g++++H++Dfd++ G++W ++lq+La R+ + +psl+iT+++s++s++  el+
  evm.model.AsparagusV1_08.212 251 TYKAFSEISPIVQFTNFTSIQAILEELHGCNKIHVVDFDVGVGGHWSSFLQELAHRRgGATPSLKITAFVSHSSHHPLELH 331
                                   ******************************************************99967789******************* PP

                          GRAS 160 etgerLakfAeelgvpfefnvlvakrledleleeL.rvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkv 238
                                    t+e+L++fA+el++pfefn+l   +le ++++++ +v++ +Ea+aVn+ +     +      +s +++vL++vk+l+Pk+
  evm.model.AsparagusV1_08.212 332 LTRENLSHFAAELNIPFEFNAL---SLEGFDPSAFlAVSSpDEAIAVNFPIGSVLNY------QS-IPTVLRFVKQLNPKI 402
                                   *********************9...8888888875355556*********9544443......44.677************ PP

                          GRAS 239 vvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerl 319
                                   vv ve+ +d+++ +F ++fl+a++ ++ l+ds++a+ +++++ ++k+Er l++++i+nvv c++++     e++  Wr+ +
  evm.model.AsparagusV1_08.212 403 VVSVEHGCDRSDLPFSTHFLHAFQACTILLDSIDAS-GANQDVANKIERYLVQPRIENVVLCRHRS----VEKMVPWRALF 478
                                   **********************************99.8999************************9....99999****** PP

                          GRAS 320 eeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                    +aGF p ++s+++++qa++ll++v+++g++ve++++sl+l+W++ +LvsvSaW+
  evm.model.AsparagusV1_08.212 479 ASAGFVPFQFSNFTETQAECLLKRVQVRGFQVEKRQASLFLCWQRGELVSVSAWK 533
                                   ******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 535 aa     Download sequence    
MWARKNELCW APVEDAGGGG GQDPSFLRWI MGDNVDDVGN NGSSFGLIDP LMGLEPNPFG  60
AQANNFQSLS LPTATTMSTL SLPLPPVFLQ EPIEEKPIHF SPNLILNHHQ QLPPPQNPSF  120
FLPLPQFNSH IETHHPHFPD SANGNSLFLR RNQLQNPSFS NPKVKDEFSG HQQAIVDQLF  180
KAAELVEAGN SIGARGILAR LNHQLPSFPV IGKPLFRSAF YFKEALLLLA NNNPPNSPLS  240
TPLDVLLKLG TYKAFSEISP IVQFTNFTSI QAILEELHGC NKIHVVDFDV GVGGHWSSFL  300
QELAHRRGGA TPSLKITAFV SHSSHHPLEL HLTRENLSHF AAELNIPFEF NALSLEGFDP  360
SAFLAVSSPD EAIAVNFPIG SVLNYQSIPT VLRFVKQLNP KIVVSVEHGC DRSDLPFSTH  420
FLHAFQACTI LLDSIDASGA NQDVANKIER YLVQPRIENV VLCRHRSVEK MVPWRALFAS  480
AGFVPFQFSN FTETQAECLL KRVQVRGFQV EKRQASLFLC WQRGELVSVS AWKC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-101GRAS family protein