PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.194

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 447aa MW: 50495.6 Da PI: 6.3288

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.194	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.8	4.5e-09	285	322	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps ++ LA+++gL+ +qV++WF N R + evm.model.AsparagusV1_08.194 285 FEHflHPYPSDVDKHILARQTGLSRSQVSNWFINARVR 322 564459******************************88 PP
2	BELL	107.6	7.7e-35	147	215	4	72
BELL 4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 elqk+ka+L+ +leeV++rY++y+eq+++v+ssFe +ag gsa++Y +lA+ka+SrhFrcLkd i++qi evm.model.AsparagusV1_08.194 147 ELQKRKARLMLMLEEVHRRYRRYCEQMRAVVSSFESIAGEGSATVYSTLASKAMSRHFRCLKDGITSQI 215 89******************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MEFSSANNQM IMQGFEQPSG DLFGFHPANS NPNPNPDQWH ADGFSLQSNQ GLSLSLTNPM 60 TSSHQEQTSQ FVDDERLLFR SSSQQQTSPF ILRRLKYLIP ARELLNEFCS VGGINSSLEE 120 GTKKKKDQWK EGGPSSSSSL CSLDLVELQK RKARLMLMLE EVHRRYRRYC EQMRAVVSSF 180 ESIAGEGSAT VYSTLASKAM SRHFRCLKDG ITSQIQATKM AMGERDSTAA APGATKGETP 240 RLKKLEQCLR QQKAFQNAGI MESQPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI 300 LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYMEELKEEE KFNPNSNPNP SAEEQKPVHG 360 LLMNESDSLS SIINNSNNHP NPNANFGEVD LDFCPYDASG VSLTLGFSRD HIDDERQVQF 420 SMLDEDGQTL PYRNLMDTHL LHDLAG*

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MEFSSANNQM IMQGFEQPSG DLFGFHPANS NPNPNPDQWH ADGFSLQSNQ GLSLSLTNPM  60
TSSHQEQTSQ FVDDERLLFR SSSQQQTSPF ILRRLKYLIP ARELLNEFCS VGGINSSLEE  120
GTKKKKDQWK EGGPSSSSSL CSLDLVELQK RKARLMLMLE EVHRRYRRYC EQMRAVVSSF  180
ESIAGEGSAT VYSTLASKAM SRHFRCLKDG ITSQIQATKM AMGERDSTAA APGATKGETP  240
RLKKLEQCLR QQKAFQNAGI MESQPWRPQR GLPERSVSVL RAWLFEHFLH PYPSDVDKHI  300
LARQTGLSRS QVSNWFINAR VRLWKPMVEE MYMEELKEEE KFNPNSNPNP SAEEQKPVHG  360
LLMNESDSLS SIINNSNNHP NPNANFGEVD LDFCPYDASG VSLTLGFSRD HIDDERQVQF  420
SMLDEDGQTL PYRNLMDTHL LHDLAG*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	123	152	KKKKDQWKEGGPSSSSSLCSLDLVELQKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-90	TALE family protein