PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.187 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 128aa MW: 14359.2 Da PI: 12.5439 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 48.2 | 1.9e-15 | 59 | 108 | 50 | 99 |
E..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 50 liyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ++y+++s++yv+tkGW++Fvk+++L+ gD+v F++ ++ +l++ ++r+ evm.model.AsparagusV1_08.187 59 YSYWNSSQSYVMTKGWSRFVKDKRLDGGDTVSFSRAVANSNRLFIDWRRA 108 889*******************************8766888899999986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 128 aa Download sequence |
MFEKVVTPAR RRQAQPPRHP EAARRALLPA ATPPPTTPRA GSSSTSRRAP PADRGGSAYS 60 YWNSSQSYVM TKGWSRFVKD KRLDGGDTVS FSRAVANSNR LFIDWRRARR LWSRARWSPR 120 GPPRGRP* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 107 | 114 | RARRLWSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G61970.1 | 7e-20 | B3 family protein |