PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_08.1764 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 144aa MW: 15854.8 Da PI: 12.0217 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 47.3 | 5.2e-15 | 26 | 68 | 3 | 49 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaa 49 y+GVr +k +g+WvAeIr+p +kr r++lg++ ta A++a++ a evm.model.AsparagusV1_08.1764 26 YRGVRMRK-WGKWVAEIREP---NKRSRIWLGSYSTAVAARAAYDTA 68 9*****99.**********9...336******************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 144 aa Download sequence |
MEGECKPSSS SSSSSSSKGA HKDRAYRGVR MRKWGKWVAE IREPNKRSRI WLGSYSTAVA 60 ARAAYDTAVF PPPAASAEVI NFSRRGSPAE GVEIELLTQH RGLVGRRRFR GRRRGPGRES 120 TRFQLPAAAA GSRSKKSQQR HQD* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G36900.1 | 1e-15 | ERF family protein |