PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1608

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 595aa MW: 66842.4 Da PI: 4.3279

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1608	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.2	1.6e-07	337	385	2	47
SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 +rWT+eE++l+ ++v+ ++ W+ ++ ++ R k+++s+++++ evm.model.AsparagusV1_08.1608 337 LRWTEEEEQLFHEVVACNPTSlgknFWDDLPQVFP-SRNSKELVSYYFNV 385 69***********7555445555******.*********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 595 aa Download sequence
MVFKLNNLPL ELPLEHDDSL QFSFQHMTNL DCHDQFASSH RHIPDKQPFP DGVSSGGNFK 60 LEILDAVNSH SNSGFTTEKT SSLPEVMRSD NEIARLESSK RPFSDDENLQ VSVKRTRQLD 120 GKFSSFIGTC EEEPLIASPS DNGFKDRKDA AGLQSSNGSH GSNFSFQWFS YSTDDESWLE 180 SPVRLSFFPG YYEDYHRPVR FNRVEESKSF VFDYPLRKRV AIGEDHQAII PVWKSKSLHD 240 SHRDGPGAST SAGHFSTDDN LGDQWSGHCV IPTPDSTSLR LNVSLGHGKI DCYCLDEGSI 300 RCVRQHVMEA REELRSILGH ERFVELGLCD MGEDVALRWT EEEEQLFHEV VACNPTSLGK 360 NFWDDLPQVF PSRNSKELVS YYFNVFMLRK RAEQNRSDPL NVDSDNDEWQ ESSNGEFGEG 420 EDDSGVESLE DAAAQDNVVH GDGLVDIHED AEEDYCEHEE YGIYDGVAGD KSRFSPNNQR 480 MGLNLHDSTG EDHEVHDDSC TSYEAQHNSN DSSGGRGDVS EGDHGDLHPE YRSEGVSGMT 540 DHDFVVDHCD PRPWDIGYFQ GLDKGLDFLP TCSVIEEVFG DESWEKSREG NGVS*

Sequence ? help Back to Top

Protein Sequence Length: 595 aa Download sequence

MVFKLNNLPL ELPLEHDDSL QFSFQHMTNL DCHDQFASSH RHIPDKQPFP DGVSSGGNFK  60
LEILDAVNSH SNSGFTTEKT SSLPEVMRSD NEIARLESSK RPFSDDENLQ VSVKRTRQLD  120
GKFSSFIGTC EEEPLIASPS DNGFKDRKDA AGLQSSNGSH GSNFSFQWFS YSTDDESWLE  180
SPVRLSFFPG YYEDYHRPVR FNRVEESKSF VFDYPLRKRV AIGEDHQAII PVWKSKSLHD  240
SHRDGPGAST SAGHFSTDDN LGDQWSGHCV IPTPDSTSLR LNVSLGHGKI DCYCLDEGSI  300
RCVRQHVMEA REELRSILGH ERFVELGLCD MGEDVALRWT EEEEQLFHEV VACNPTSLGK  360
NFWDDLPQVF PSRNSKELVS YYFNVFMLRK RAEQNRSDPL NVDSDNDEWQ ESSNGEFGEG  420
EDDSGVESLE DAAAQDNVVH GDGLVDIHED AEEDYCEHEE YGIYDGVAGD KSRFSPNNQR  480
MGLNLHDSTG EDHEVHDDSC TSYEAQHNSN DSSGGRGDVS EGDHGDLHPE YRSEGVSGMT  540
DHDFVVDHCD PRPWDIGYFQ GLDKGLDFLP TCSVIEEVFG DESWEKSREG NGVS*