PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_08.1577
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 156aa    MW: 17442.7 Da    PI: 4.4137
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_08.1577genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB73.82.8e-231193385
                          NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplk 84
                                   ++d  lP a + +i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al  lGf +y+e++ 
  evm.model.AsparagusV1_08.1577 11 KEDVSLPKATMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCSREEKRTIAPEHVLKALEVLGFGEYIEEVY 92
                                   68999**************************************************************************985 PP

                          NF-YB 85 v 85
                                   +
  evm.model.AsparagusV1_08.1577 93 A 93
                                   4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
MEPMDIVGKS KEDVSLPKAT MFKIIKEMLP PDVRVARDAQ DLLVECCVEF INLISSESNE  60
VCSREEKRTI APEHVLKALE VLGFGEYIEE VYAAYEQHKL DTLDSPKGVK FSGADMTEEE  120
AVAEQQRMFA EARARMNNGV SNTQQQQKRS DSDPS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.41e-88NF-YB family protein