PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_08.1500

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TALE

Protein Properties

Length: 426aa MW: 47893.4 Da PI: 9.4869

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_08.1500	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	29.5	1.2e-09	295	332	19	54
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yps +++ LA+++gL+ +qV++WF N R + evm.model.AsparagusV1_08.1500 295 FEHflHPYPSDADKHLLARQTGLSRNQVSNWFINARVR 332 665559******************************88 PP
2	BELL	120	1.1e-38	156	226	2	72
BELL 2 rqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 r e+q++k+kLls+l+eVd+rY++y++q+++v++sF+ v+g+ +a+pYt+lA+ka+SrhFrcLkdai+ q+ evm.model.AsparagusV1_08.1500 156 RFEHQRRKSKLLSMLDEVDRRYNHYCDQMKMVVNSFDSVMGYCAATPYTALAQKAMSRHFRCLKDAITAQL 226 779*****************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MQLFLINPQQ QQQQSAGGAF EASSFSAGGL SLSLSSSQQQ QQQQQQELRL RDGILYFNNN 60 NTSSNSNSNP QQQQLQGQVM GPSNYGLVNV LRNSKYSRPA QELLEEFCSV GRGQLIRGNS 120 GRSMQQHHGS SSTNPNPNPN AASSSSATKE LSPADRFEHQ RRKSKLLSML DEVDRRYNHY 180 CDQMKMVVNS FDSVMGYCAA TPYTALAQKA MSRHFRCLKD AITAQLKHTC EALGEKEAGG 240 SSGITKGETP RLKMLDQRLR QQRAFHQMGM MEQEAWRPQR GLPERSVNIL RAWLFEHFLH 300 PYPSDADKHL LARQTGLSRN QVSNWFINAR VRLWKPMVEE MYQQEAKEET DQATTSTQRD 360 DDQPQNNQIT PQSHSPSAML RPEAXXXXRM RLGAAGDVSL TLGLRHTGNA PEKNRPYSIR 420 DFGGC*

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MQLFLINPQQ QQQQSAGGAF EASSFSAGGL SLSLSSSQQQ QQQQQQELRL RDGILYFNNN  60
NTSSNSNSNP QQQQLQGQVM GPSNYGLVNV LRNSKYSRPA QELLEEFCSV GRGQLIRGNS  120
GRSMQQHHGS SSTNPNPNPN AASSSSATKE LSPADRFEHQ RRKSKLLSML DEVDRRYNHY  180
CDQMKMVVNS FDSVMGYCAA TPYTALAQKA MSRHFRCLKD AITAQLKHTC EALGEKEAGG  240
SSGITKGETP RLKMLDQRLR QQRAFHQMGM MEQEAWRPQR GLPERSVNIL RAWLFEHFLH  300
PYPSDADKHL LARQTGLSRN QVSNWFINAR VRLWKPMVEE MYQQEAKEET DQATTSTQRD  360
DDQPQNNQIT PQSHSPSAML RPEAXXXXRM RLGAAGDVSL TLGLRHTGNA PEKNRPYSIR  420
DFGGC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23760.2	1e-147	TALE family protein